C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocampus abundant transcript-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375344 HIATL1-001 ENSG00000148110 9606 + 9:94374551-94461042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375344 3.885±0.00 5.777±0.00 1.698±0.00 3.137±0.93 6.272±1.31 4.495±0.35 2.806±1.29 4.400±2.40 1.715±0.91 5.267±2.27 1.587±1.01 5.573±0.63 12.278±1.61 5.054±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XX CIL_0008XX_0001 VISTA 9:93838844-94440653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155487 Hiatl1-001 protein_coding Mus_musculus 0 1949
ENSMUST00000054730 Hiatl1-201 protein_coding Mus_musculus 0 1869
ENSMUST00000148779 Hiatl1-004 retained_intron Mus_musculus 0 630

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