C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148288 GBGT1 9606 - 9:133152948-133163945 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372036 GBGT1-006 133159780-133163895 protein_coding
  ENST00000372038 GBGT1-005 133154075-133163897 protein_coding
  ENST00000372040 GBGT1-001 133152953-133163945 protein_coding
  ENST00000372043 GBGT1-002 133152953-133163919 protein_coding
  ENST00000470431 GBGT1-003 133152953-133163919 processed_transcript
  ENST00000472281 GBGT1-004 133152953-133163919 processed_transcript
  ENST00000487864 GBGT1-007 133161048-133163901 processed_transcript
  ENST00000540636 GBGT1-201 133152948-133163945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372036ENST00000372038ENST00000372040ENST00000372043ENST00000470431ENST00000472281ENST00000487864ENST00000540636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372036 N/A N/A N/A 0.493±0.23 N/A 0.793±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372038 N/A N/A N/A N/A N/A N/A 0.165±0.00 0.195±0.00 N/A 0.669±0.00 N/A N/A N/A N/A
ENST00000372040 5.432±0.00 4.957±0.00 N/A N/A 0.340±0.00 N/A 0.683±0.48 1.208±0.00 N/A N/A N/A 1.849±0.69 8.625±0.92 2.331±0.00
ENST00000372043 N/A N/A 0.070±0.00 0.720±0.00 2.426±0.00 0.665±0.00 N/A 2.557±0.00 0.491±0.00 2.665±0.00 N/A 4.503±0.00 2.081±0.00 0.486±0.00
ENST00000470431 N/A N/A N/A N/A 0.688±0.00 0.604±0.29 0.125±0.06 0.392±0.21 0.059±0.00 0.275±0.12 N/A 1.785±1.06 0.446±0.00 0.097±0.00
ENST00000472281 N/A 0.817±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.007±0.00 N/A N/A
ENST00000487864 N/A N/A 0.168±0.00 N/A N/A N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000540636 N/A N/A N/A N/A N/A 1.836±0.00 N/A N/A 0.125±0.00 N/A 0.654±0.00 4.351±0.00 3.573±0.00 0.536±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0009247 TAS glycolipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0046872 IEA metal ion binding
GO:0047277 IEA globoside alpha-N-acetylgalactosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005257 protein_coding Danio_rerio
ENSDARG00000011283 protein_coding Danio_rerio
ENSDARG00000019207 abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Danio_rerio
ENSDARG00000025275 gbgt1l1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 protein_coding Danio_rerio
ENSDARG00000035555 gbgt1l3 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 protein_coding Danio_rerio
ENSDARG00000068503 gbgt1l4 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 protein_coding Danio_rerio
ENSDARG00000091936 protein_coding Danio_rerio
ENSDARG00000091944 protein_coding Danio_rerio
ENSDARG00000091969 protein_coding Danio_rerio
ENSDARG00000092718 gbgt1l2 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 protein_coding Danio_rerio
ENSMUSG00000026829 Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein_coding Mus_musculus

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