C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019207 abo 7955 - 5:26693988-26706393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027237 abo-001 26693988-26706389 protein_coding
  ENSDART00000139487 abo-002 26701209-26706393 retained_intron
  ENSDART00000154616 abo-201 26693988-26695338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027237ENSDART00000139487ENSDART00000154616
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027237 0.518±0.15 N/A N/A N/A N/A
ENSDART00000139487 0.776±0.00 4.477±0.60 8.509±0.00 N/A N/A
ENSDART00000154616 0.129±0.00 0.791±0.07 7.568±0.00 0.976±0.00 0.492±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005975 IEA carbohydrate metabolic process
GO:0016020 IEA membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148288 GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein_coding Homo_sapiens
ENSG00000175164 ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Homo_sapiens
ENSMUSG00000015787 Abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) protein_coding Mus_musculus
ENSMUSG00000026829 Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein_coding Mus_musculus

Loading