C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026829 Gbgt1 10090 + 2:28496891-28505415 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028172 Gbgt1-001 28497746-28505415 protein_coding
  ENSMUST00000127958 Gbgt1-002 28496891-28503262 processed_transcript
  ENSMUST00000163121 Gbgt1-201 28496891-28505415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028172ENSMUST00000127958ENSMUST00000163121
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028172 2.845±0.00 0.760±0.51 N/A 1.104±0.22 1.924±0.00 N/A N/A 0.275±0.06 0.766±0.00 0.239±0.05 1.636±0.89 0.342±0.17 N/A
ENSMUST00000127958 N/A 0.788±0.03 0.122±0.00 N/A 1.337±0.07 0.467±0.00 0.419±0.14 0.335±0.00 1.918±0.00 N/A 2.991±0.93 N/A N/A
ENSMUST00000163121 1.184±0.00 0.895±0.55 0.165±0.00 1.769±0.69 1.610±0.57 N/A 0.281±0.13 0.240±0.13 0.806±0.19 0.263±0.14 1.344±0.83 0.240±0.07 0.660±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0030259 TAS lipid glycosylation
GO:0046872 IEA metal ion binding
GO:0047277 IDA globoside alpha-N-acetylgalactosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005257 protein_coding Danio_rerio
ENSDARG00000011283 protein_coding Danio_rerio
ENSDARG00000019207 abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Danio_rerio
ENSDARG00000025275 gbgt1l1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 protein_coding Danio_rerio
ENSDARG00000035555 gbgt1l3 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 protein_coding Danio_rerio
ENSDARG00000068503 gbgt1l4 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 protein_coding Danio_rerio
ENSDARG00000091936 protein_coding Danio_rerio
ENSDARG00000091944 protein_coding Danio_rerio
ENSDARG00000091969 protein_coding Danio_rerio
ENSDARG00000092718 gbgt1l2 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 protein_coding Danio_rerio
ENSG00000148288 GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein_coding Homo_sapiens

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