C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: surfeit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148290 SURF1 9606 - 9:133351755-133356676 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371974 SURF1-001 133351755-133356485 protein_coding
  ENST00000437995 SURF1-003 133351913-133356320 retained_intron
  ENST00000463965 SURF1-004 133356105-133356676 processed_transcript
  ENST00000495952 SURF1-002 133351875-133354253 processed_transcript
  ENST00000615505 SURF1-201 133351805-133356485 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371974ENST00000437995ENST00000495952ENST00000615505
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371974 10.977±0.00 19.836±0.00 N/A 3.236±2.56 16.070±0.00 4.364±0.00 4.078±0.00 2.137±0.00 8.890±8.23 4.958±0.00 6.768±5.37 13.156±0.00 4.994±0.00 N/A
ENST00000437995 4.927±0.00 8.561±0.00 N/A 8.994±0.00 5.317±5.15 10.157±0.00 8.684±0.00 15.665±0.00 13.676±0.00 N/A 7.761±0.00 N/A 9.991±0.00 19.316±0.00
ENST00000495952 N/A N/A N/A N/A N/A N/A N/A 3.623±0.00 0.507±0.00 N/A N/A N/A N/A N/A
ENST00000615505 7.065±0.00 12.003±0.00 0.739±0.00 16.905±0.00 5.891±0.00 9.002±7.92 5.921±5.63 25.765±0.00 9.565±0.00 12.856±11.80 7.812±0.00 11.680±8.23 19.077±8.57 18.252±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DK CIL_0006DK_0001 CGP 9:133348214-133356676
CIL_0006DJ CIL_0006DJ_0001 CGP 9:133351755-133361169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004129 IEA cytochrome-c oxidase activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005746 TAS mitochondrial respiratory chain
GO:0006119 IMP oxidative phosphorylation
GO:0006754 IMP ATP biosynthetic process
GO:0008535 TAS respiratory chain complex IV assembly
GO:0009060 TAS aerobic respiration
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055114 TAS oxidation-reduction process
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003592 surf1 surfeit 1 protein_coding Danio_rerio
ENSMUSG00000015790 Surf1 surfeit gene 1 protein_coding Mus_musculus

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