C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148303-ENSG00000148290 CGP 9606 9:133348214-133356676
GeneTranscriptPositionBiotype
ENSG00000148290 (SURF1)
surfeit 1 		ENST00000371974 (SURF1-001) 133351755-133356485 protein_coding
ENST00000437995 (SURF1-003) 133351913-133356320 retained_intron
ENST00000463965 (SURF1-004) 133356105-133356676 processed_transcript
ENST00000495952 (SURF1-002) 133351875-133354253 processed_transcript
ENST00000615505 (SURF1-201) 133351805-133356485 protein_coding
ENSG00000148291 (SURF2)
surfeit 2 		ENST00000371964 (SURF2-001) 133356552-133361169 protein_coding
ENST00000486887 (SURF2-003) 133357048-133360024 processed_transcript
ENST00000495524 (SURF2-002) 133356578-133360107 processed_transcript
ENSG00000148303 (RPL7A)
ribosomal protein L7a 		ENST00000315731 (RPL7A-005) 133348922-133351426 protein_coding
ENST00000323345 (RPL7A-009) 133348214-133351426 protein_coding
ENST00000426651 (RPL7A-004) 133348252-133350318 protein_coding
ENST00000463740 (RPL7A-001) 133348218-133351426 processed_transcript
ENST00000468019 (RPL7A-003) 133348252-133351372 processed_transcript
ENST00000485706 (RPL7A-006) 133348922-133350383 processed_transcript
ENST00000489392 (RPL7A-007) 133348937-133351385 processed_transcript
ENST00000492798 (RPL7A-008) 133350850-133351413 processed_transcript
ENST00000496554 (RPL7A-002) 133348218-133350695 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006DK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062647-ENSMUSG00000015790 CGP 10090 2:26910764-26916530
GeneTranscriptPositionBiotype
ENSMUSG00000014873 (Surf2)
surfeit gene 2 		ENSMUST00000015017 (Surf2-001) 26916367-26920183 protein_coding
ENSMUST00000125408 (Surf2-005) 26916669-26919821 processed_transcript
ENSMUST00000126947 (Surf2-002) 26916381-26920172 processed_transcript
ENSMUST00000135506 (Surf2-006) 26916669-26920166 retained_intron
ENSMUST00000143098 (Surf2-004) 26917428-26919835 processed_transcript
ENSMUST00000157066 (Surf2-003) 26916813-26919953 processed_transcript
ENSMUSG00000062647 (Rpl7a)
ribosomal protein L7A 		ENSMUST00000102898 (Rpl7a-001) 26910764-26913318 protein_coding
ENSMUST00000129673 (Rpl7a-005) 26912192-26913318 processed_transcript
ENSMUST00000136269 (Rpl7a-002) 26910817-26913057 processed_transcript
ENSMUST00000137376 (Rpl7a-004) 26910821-26913318 processed_transcript
ENSMUST00000143678 (Rpl7a-003) 26911006-26913318 processed_transcript
ENSMUST00000147143 (Rpl7a-007) 26912619-26913318 processed_transcript
ENSMUST00000149339 (Rpl7a-006) 26912671-26913212 processed_transcript
ENSMUSG00000065258 (Gm23969)
predicted gene, 23969 		ENSMUST00000083324 (Gm23969-201) 26911261-26911334 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DK_0001ENSG00000148290ENST00000371974ENST00000437995ENST00000463965ENST00000495952ENST00000615505ENSG00000148291ENST00000371964ENST00000486887ENST00000495524ENSG00000148303ENST00000315731ENST00000323345ENST00000426651ENST00000463740ENST00000468019ENST00000485706ENST00000489392ENST00000492798ENST00000496554CIL_0006DK_0002ENSMUSG00000014873ENSMUST00000015017ENSMUST00000125408ENSMUST00000126947ENSMUST00000135506ENSMUST00000143098ENSMUST00000157066ENSMUSG00000062647ENSMUST00000102898ENSMUST00000129673ENSMUST00000136269ENSMUST00000137376ENSMUST00000143678ENSMUST00000147143ENSMUST00000149339ENSMUSG00000065258ENSMUST00000083324
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DK_0001ENSG00000148290ENST00000371974ENST00000437995ENST00000495952ENST00000615505ENSG00000148291ENST00000371964ENST00000495524ENSG00000148303ENST00000315731ENST00000323345ENST00000468019CIL_0006DK_0002ENSMUSG00000014873ENSMUST00000015017ENSMUST00000143098ENSMUSG00000062647ENSMUST00000102898ENSMUST00000136269ENSMUST00000149339ENSMUSG00000065258ENSMUST00000083324
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148290 ENST00000371974 10.977±0.00 19.836±0.00 N/A 3.236±2.56 16.070±0.00 4.364±0.00 4.078±0.00 2.137±0.00 8.890±8.23 4.958±0.00 6.768±5.37 13.156±0.00 4.994±0.00 N/A
ENST00000437995 4.927±0.00 8.561±0.00 N/A 8.994±0.00 5.317±5.15 10.157±0.00 8.684±0.00 15.665±0.00 13.676±0.00 N/A 7.761±0.00 N/A 9.991±0.00 19.316±0.00
ENST00000463965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495952 N/A N/A N/A N/A N/A N/A N/A 3.623±0.00 0.507±0.00 N/A N/A N/A N/A N/A
ENST00000615505 7.065±0.00 12.003±0.00 0.739±0.00 16.905±0.00 5.891±0.00 9.002±7.92 5.921±5.63 25.765±0.00 9.565±0.00 12.856±11.80 7.812±0.00 11.680±8.23 19.077±8.57 18.252±0.00
ENSG00000148291 ENST00000371964 8.552±0.00 19.263±0.00 0.310±0.00 8.500±4.24 7.064±6.44 7.390±7.20 3.023±2.09 10.527±9.73 4.836±4.24 8.258±0.00 8.361±6.99 13.143±8.41 10.244±2.76 81.482±3.92
ENST00000486887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495524 N/A N/A N/A N/A N/A 0.659±0.00 N/A N/A N/A N/A N/A 0.611±0.00 N/A N/A
ENSG00000148303 ENST00000315731 275.424±0.00 415.606±0.00 N/A 64.374±0.00 227.852±0.00 336.505±0.00 75.555±0.00 155.984±0.00 80.881±0.00 266.148±0.00 139.667±0.00 458.098±0.00 N/A 222.966±0.00
ENST00000323345 321.690±0.00 423.980±0.00 24.217±0.00 53.256±5.53 161.222±77.90 278.729±194.74 45.348±14.71 88.567±16.59 84.760±9.61 94.474±25.71 94.717±15.33 1005.401±969.31 1056.270±419.92 300.899±15.14
ENST00000426651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468019 N/A N/A N/A 45.663±0.00 N/A N/A 41.394±0.00 110.274±0.00 82.512±0.00 344.985±0.00 150.240±0.00 N/A N/A N/A
ENST00000485706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014873 ENSMUST00000015017 N/A N/A N/A 30.249±0.00 N/A N/A N/A N/A 36.100±2.24 N/A N/A N/A N/A N/A
ENSMUST00000125408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143098 N/A N/A N/A 54.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062647 ENSMUST00000102898 284.453±92.39 93.604±12.66 564.283±18.12 365.477±216.70 208.301±18.61 355.477±74.48 152.255±26.50 349.630±30.35 570.812±404.52 179.649±8.82 224.342±9.34 484.790±115.00 571.907±285.09 95.421±40.05
ENSMUST00000129673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136269 N/A 34.045±5.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149339 N/A N/A N/A 54.147±0.00 N/A N/A N/A N/A N/A N/A N/A 334.896±0.00 200.996±0.00 50.233±0.00
ENSMUSG00000065258 ENSMUST00000083324 N/A N/A N/A N/A N/A N/A N/A N/A 48016.150±2128.95 N/A N/A N/A N/A N/A

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