C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148290-ENSG00000148291 CGP 9606 9:133351755-133361169
GeneTranscriptPositionBiotype
ENSG00000148290 (SURF1)
surfeit 1 		ENST00000371974 (SURF1-001) 133351755-133356485 protein_coding
ENST00000437995 (SURF1-003) 133351913-133356320 retained_intron
ENST00000463965 (SURF1-004) 133356105-133356676 processed_transcript
ENST00000495952 (SURF1-002) 133351875-133354253 processed_transcript
ENST00000615505 (SURF1-201) 133351805-133356485 protein_coding
ENSG00000148291 (SURF2)
surfeit 2 		ENST00000371964 (SURF2-001) 133356552-133361169 protein_coding
ENST00000486887 (SURF2-003) 133357048-133360024 processed_transcript
ENST00000495524 (SURF2-002) 133356578-133360107 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006DJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015790-ENSMUSG00000014873 CGP 10090 2:26913383-26920183
GeneTranscriptPositionBiotype
ENSMUSG00000014867 (Surf4)
surfeit gene 4 		ENSMUST00000015011 (Surf4-001) 26920040-26933928 protein_coding
ENSMUST00000153641 (Surf4-003) 26921962-26933383 nonsense_mediated_decay
ENSMUST00000154651 (Surf4-002) 26924970-26933781 protein_coding
ENSMUSG00000014873 (Surf2)
surfeit gene 2 		ENSMUST00000015017 (Surf2-001) 26916367-26920183 protein_coding
ENSMUST00000125408 (Surf2-005) 26916669-26919821 processed_transcript
ENSMUST00000126947 (Surf2-002) 26916381-26920172 processed_transcript
ENSMUST00000135506 (Surf2-006) 26916669-26920166 retained_intron
ENSMUST00000143098 (Surf2-004) 26917428-26919835 processed_transcript
ENSMUST00000157066 (Surf2-003) 26916813-26919953 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DJ_0001ENSG00000148290ENST00000371974ENST00000437995ENST00000463965ENST00000495952ENST00000615505ENSG00000148291ENST00000371964ENST00000486887ENST00000495524CIL_0006DJ_0002ENSMUSG00000014867ENSMUST00000015011ENSMUST00000153641ENSMUST00000154651ENSMUSG00000014873ENSMUST00000015017ENSMUST00000125408ENSMUST00000126947ENSMUST00000135506ENSMUST00000143098ENSMUST00000157066
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DJ_0001ENSG00000148290ENST00000371974ENST00000437995ENST00000495952ENST00000615505ENSG00000148291ENST00000371964ENST00000495524CIL_0006DJ_0002ENSMUSG00000014867ENSMUST00000015011ENSMUST00000153641ENSMUSG00000014873ENSMUST00000015017ENSMUST00000143098
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148290 ENST00000371974 10.977±0.00 19.836±0.00 N/A 3.236±2.56 16.070±0.00 4.364±0.00 4.078±0.00 2.137±0.00 8.890±8.23 4.958±0.00 6.768±5.37 13.156±0.00 4.994±0.00 N/A
ENST00000437995 4.927±0.00 8.561±0.00 N/A 8.994±0.00 5.317±5.15 10.157±0.00 8.684±0.00 15.665±0.00 13.676±0.00 N/A 7.761±0.00 N/A 9.991±0.00 19.316±0.00
ENST00000463965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495952 N/A N/A N/A N/A N/A N/A N/A 3.623±0.00 0.507±0.00 N/A N/A N/A N/A N/A
ENST00000615505 7.065±0.00 12.003±0.00 0.739±0.00 16.905±0.00 5.891±0.00 9.002±7.92 5.921±5.63 25.765±0.00 9.565±0.00 12.856±11.80 7.812±0.00 11.680±8.23 19.077±8.57 18.252±0.00
ENSG00000148291 ENST00000371964 8.552±0.00 19.263±0.00 0.310±0.00 8.500±4.24 7.064±6.44 7.390±7.20 3.023±2.09 10.527±9.73 4.836±4.24 8.258±0.00 8.361±6.99 13.143±8.41 10.244±2.76 81.482±3.92
ENST00000486887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495524 N/A N/A N/A N/A N/A 0.659±0.00 N/A N/A N/A N/A N/A 0.611±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014867 ENSMUST00000015011 85.655±2.84 129.375±13.48 81.259±6.09 26.124±11.78 81.623±10.64 117.962±3.96 34.497±5.44 83.598±9.27 66.221±26.66 63.301±10.85 23.049±12.19 140.682±36.93 152.419±4.79 67.567±2.60
ENSMUST00000153641 N/A 180.865±28.07 N/A N/A 99.308±3.84 N/A N/A N/A 93.062±7.28 87.255±1.80 N/A 137.284±19.09 N/A N/A
ENSMUST00000154651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000014873 ENSMUST00000015017 N/A N/A N/A 30.249±0.00 N/A N/A N/A N/A 36.100±2.24 N/A N/A N/A N/A N/A
ENSMUST00000125408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143098 N/A N/A N/A 54.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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