C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148444 COMMD3 9606 + 10:22315974-22320308 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376836 COMMD3-001 22315974-22320308 protein_coding
  ENST00000444869 COMMD3-003 22316420-22320287 protein_coding
  ENST00000448361 COMMD3-004 22316445-22320306 protein_coding
  ENST00000456711 COMMD3-002 22316417-22320256 protein_coding
  ENST00000463688 COMMD3-014 22316441-22320306 retained_intron
  ENST00000468179 COMMD3-015 22316399-22319281 retained_intron
  ENST00000468469 COMMD3-012 22316735-22318826 processed_transcript
  ENST00000470045 COMMD3-006 22316415-22318403 retained_intron
  ENST00000471350 COMMD3-017 22318272-22319281 protein_coding
  ENST00000472610 COMMD3-009 22316428-22318713 nonsense_mediated_decay
  ENST00000472673 COMMD3-013 22317494-22318364 processed_transcript
  ENST00000479958 COMMD3-011 22316409-22320303 retained_intron
  ENST00000483684 COMMD3-016 22317884-22320306 processed_transcript
  ENST00000496071 COMMD3-010 22316429-22320306 retained_intron
  ENST00000602574 COMMD3-018 22316386-22320306 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376836ENST00000456711ENST00000468179ENST00000483684
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376836 N/A 18.957±0.00 N/A 16.316±0.00 N/A 5.970±0.00 8.373±0.00 16.356±0.00 21.135±0.74 13.251±4.34 20.075±0.00
ENST00000456711 2.921±0.00 N/A 7.523±0.00 11.270±0.86 6.188±0.00 8.936±0.93 N/A N/A N/A N/A N/A
ENST00000468179 N/A N/A N/A N/A N/A N/A 5.454±0.00 N/A N/A N/A N/A
ENST00000483684 N/A N/A N/A N/A N/A N/A N/A 8.567±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000780 CIL_000780_0002 CGP 10:22315974-22329542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045402 commd3 COMM domain containing 3 protein_coding Danio_rerio
ENSMUSG00000051154 Commd3 COMM domain containing 3 protein_coding Mus_musculus

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