C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000780_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045402-ENSDARG00000006010 CGP 7955 24:17805898-17816340
GeneTranscriptPositionBiotype
ENSDARG00000006010 (bmi1a)
B lymphoma Mo-MLV insertion region 1a 		ENSDART00000066765 (bmi1a-002) 17809106-17816340 protein_coding
ENSDART00000129554 (bmi1a-001) 17809434-17816340 protein_coding
ENSDART00000145949 (bmi1a-003) 17811984-17812772 protein_coding
ENSDARG00000045402 (commd3)
COMM domain containing 3 		ENSDART00000066764 (commd3-001) 17805898-17808748 protein_coding
ENSDART00000131577 (commd3-003) 17805948-17808592 retained_intron
ENSDART00000143058 (commd3-002) 17806905-17807760 retained_intron
CIL_000780_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148444-ENSG00000269897 CGP 9606 10:22315974-22329542
GeneTranscriptPositionBiotype
ENSG00000148444 (COMMD3)
COMM domain containing 3 		ENST00000376836 (COMMD3-001) 22315974-22320308 protein_coding
ENST00000444869 (COMMD3-003) 22316420-22320287 protein_coding
ENST00000448361 (COMMD3-004) 22316445-22320306 protein_coding
ENST00000456711 (COMMD3-002) 22316417-22320256 protein_coding
ENST00000463688 (COMMD3-014) 22316441-22320306 retained_intron
ENST00000468179 (COMMD3-015) 22316399-22319281 retained_intron
ENST00000468469 (COMMD3-012) 22316735-22318826 processed_transcript
ENST00000470045 (COMMD3-006) 22316415-22318403 retained_intron
ENST00000471350 (COMMD3-017) 22318272-22319281 protein_coding
ENST00000472610 (COMMD3-009) 22316428-22318713 nonsense_mediated_decay
ENST00000472673 (COMMD3-013) 22317494-22318364 processed_transcript
ENST00000479958 (COMMD3-011) 22316409-22320303 retained_intron
ENST00000483684 (COMMD3-016) 22317884-22320306 processed_transcript
ENST00000496071 (COMMD3-010) 22316429-22320306 retained_intron
ENST00000602574 (COMMD3-018) 22316386-22320306 retained_intron
ENSG00000168283 (BMI1)
BMI1 proto-oncogene, polycomb ring finger 		ENST00000376663 (BMI1-001) 22321211-22331484 protein_coding
ENST00000416820 (BMI1-008) 22325657-22327791 protein_coding
ENST00000442508 (BMI1-002) 22322106-22328160 protein_coding
ENST00000443519 (BMI1-005) 22326519-22329398 protein_coding
ENST00000456675 (BMI1-011) 22321585-22327804 retained_intron
ENST00000490311 (BMI1-007) 22327946-22329491 retained_intron
ENST00000496174 (BMI1-006) 22327882-22329090 retained_intron
ENST00000602358 (BMI1-010) 22325670-22328671 retained_intron
ENST00000602523 (BMI1-009) 22321459-22326940 retained_intron
ENST00000602524 (BMI1-012) 22325933-22326831 retained_intron
CIL_000780_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051154-ENSMUSG00000026739 CGP 10090 2:18672384-18686629
GeneTranscriptPositionBiotype
ENSMUSG00000026739 (Bmi1)
Bmi1 polycomb ring finger oncogene 		ENSMUST00000028071 (Bmi1-001) 18677018-18686629 protein_coding
ENSMUST00000051929 (Bmi1-201) 18680372-18686130 protein_coding
ENSMUST00000132014 (Bmi1-006) 18677280-18682365 processed_transcript
ENSMUST00000134734 (Bmi1-004) 18680994-18683030 protein_coding
ENSMUST00000147365 (Bmi1-005) 18681107-18682856 protein_coding
ENSMUST00000150834 (Bmi1-002) 18677807-18683676 protein_coding
ENSMUST00000156284 (Bmi1-003) 18680374-18684013 protein_coding
ENSMUSG00000051154 (Commd3)
COMM domain containing 3 		ENSMUST00000061158 (Commd3-001) 18672423-18676231 protein_coding
ENSMUST00000130537 (Commd3-008) 18674347-18675923 processed_transcript
ENSMUST00000131369 (Commd3-006) 18673658-18674397 processed_transcript
ENSMUST00000133685 (Commd3-003) 18673961-18675928 processed_transcript
ENSMUST00000133828 (Commd3-004) 18672435-18674635 processed_transcript
ENSMUST00000137317 (Commd3-011) 18672523-18674400 processed_transcript
ENSMUST00000137817 (Commd3-007) 18674085-18675981 processed_transcript
ENSMUST00000150590 (Commd3-009) 18674424-18675006 processed_transcript
ENSMUST00000151230 (Commd3-010) 18674649-18675501 processed_transcript
ENSMUST00000151974 (Commd3-002) 18672433-18674692 processed_transcript
ENSMUST00000154519 (Commd3-005) 18672436-18674512 processed_transcript
ENSMUST00000171845 (Commd3-201) 18672384-18676230 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000780_0001ENSDARG00000006010ENSDART00000066765ENSDART00000129554ENSDART00000145949ENSDARG00000045402ENSDART00000066764ENSDART00000131577ENSDART00000143058CIL_000780_0002ENSG00000148444ENST00000376836ENST00000444869ENST00000448361ENST00000456711ENST00000463688ENST00000468179ENST00000468469ENST00000470045ENST00000471350ENST00000472610ENST00000472673ENST00000479958ENST00000483684ENST00000496071ENST00000602574ENSG00000168283ENST00000376663ENST00000416820ENST00000442508ENST00000443519ENST00000456675ENST00000490311ENST00000496174ENST00000602358ENST00000602523ENST00000602524CIL_000780_0003ENSMUSG00000026739ENSMUST00000028071ENSMUST00000051929ENSMUST00000132014ENSMUST00000134734ENSMUST00000147365ENSMUST00000150834ENSMUST00000156284ENSMUSG00000051154ENSMUST00000061158ENSMUST00000130537ENSMUST00000131369ENSMUST00000133685ENSMUST00000133828ENSMUST00000137317ENSMUST00000137817ENSMUST00000150590ENSMUST00000151230ENSMUST00000151974ENSMUST00000154519ENSMUST00000171845
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000780_0001ENSDARG00000006010ENSDART00000066765ENSDART00000129554ENSDARG00000045402ENSDART00000066764ENSDART00000143058CIL_000780_0002ENSG00000148444ENST00000376836ENST00000456711ENST00000468179ENST00000483684ENSG00000168283ENST00000376663ENST00000490311ENST00000496174CIL_000780_0003ENSMUSG00000026739ENSMUST00000028071ENSMUST00000051929ENSMUST00000132014ENSMUST00000156284ENSMUSG00000051154ENSMUST00000061158ENSMUST00000133685ENSMUST00000133828ENSMUST00000137317ENSMUST00000137817ENSMUST00000151974ENSMUST00000154519ENSMUST00000171845
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006010 ENSDART00000066765 N/A N/A N/A N/A N/A N/A 0.732±0.05 6.259±0.00 N/A N/A 0.664±0.00 N/A N/A N/A
ENSDART00000129554 N/A N/A N/A 12.510±3.18 N/A N/A 3.315±2.95 9.604±2.87 0.812±0.00 N/A 0.403±0.00 N/A N/A N/A
ENSDART00000145949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000045402 ENSDART00000066764 N/A N/A N/A 23.204±10.47 N/A N/A 8.257±4.03 4.081±3.34 N/A N/A 5.363±0.00 N/A N/A N/A
ENSDART00000131577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143058 N/A N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148444 ENST00000376836 N/A N/A N/A N/A 18.957±0.00 N/A 16.316±0.00 N/A 5.970±0.00 8.373±0.00 16.356±0.00 21.135±0.74 13.251±4.34 20.075±0.00
ENST00000444869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456711 N/A N/A 2.921±0.00 N/A N/A 7.523±0.00 11.270±0.86 6.188±0.00 8.936±0.93 N/A N/A N/A N/A N/A
ENST00000463688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468179 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.454±0.00 N/A N/A N/A N/A
ENST00000468469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.567±0.00 N/A N/A N/A
ENST00000496071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168283 ENST00000376663 12.161±0.00 16.408±0.00 1.233±0.00 12.103±4.91 11.410±1.41 11.968±10.63 4.909±1.91 11.313±7.87 4.579±0.42 5.497±2.37 5.955±4.46 8.379±3.94 5.590±1.17 17.935±0.33
ENST00000416820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.748±0.00 N/A N/A N/A
ENST00000496174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.993±0.00 56.846±0.00
ENST00000602358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026739 ENSMUST00000028071 4.958±1.14 12.417±6.21 5.651±0.53 11.648±9.25 10.194±4.95 3.825±1.60 5.048±0.80 9.141±2.16 3.129±1.00 13.476±3.00 4.993±0.55 9.711±5.67 3.363±1.50 33.319±8.11
ENSMUST00000051929 5.611±2.13 9.933±3.64 3.839±0.17 7.848±5.34 4.746±0.73 1.757±0.15 3.970±0.90 2.407±0.00 3.066±1.02 3.307±0.47 4.208±0.57 7.393±3.18 2.909±2.01 6.448±3.06
ENSMUST00000132014 N/A 18.137±4.64 N/A N/A 8.294±0.00 N/A N/A N/A 2.925±0.00 N/A N/A N/A N/A 44.983±1.51
ENSMUST00000134734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156284 N/A N/A N/A 3.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.271±0.00
ENSMUSG00000051154 ENSMUST00000061158 30.181±2.40 17.339±2.87 42.055±10.87 43.419±10.57 19.771±4.78 9.152±1.84 23.026±9.43 39.207±9.86 32.505±7.68 22.123±2.94 35.938±11.08 18.998±19.45 35.471±7.25 31.538±3.41
ENSMUST00000130537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.855±3.66 N/A
ENSMUST00000133828 N/A 202.835±40.54 N/A N/A 28.842±6.62 20.843±3.59 N/A 11.394±0.00 23.128±8.48 10.076±0.55 N/A 29.921±5.83 N/A N/A
ENSMUST00000137317 N/A N/A N/A 80.279±0.00 N/A N/A N/A N/A N/A N/A N/A 135.791±0.00 78.216±43.12 73.934±0.00
ENSMUST00000137817 N/A N/A N/A 12.718±0.00 N/A N/A N/A N/A N/A N/A N/A 22.963±0.00 N/A 9.344±0.00
ENSMUST00000150590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151974 N/A N/A N/A N/A N/A N/A N/A N/A 22.813±0.00 N/A N/A 10.589±0.00 N/A N/A
ENSMUST00000154519 N/A N/A N/A N/A 8.034±0.00 5.248±0.00 N/A N/A N/A 5.343±0.21 N/A 7.249±0.17 N/A N/A
ENSMUST00000171845 N/A N/A 10.527±0.00 10.009±0.00 17.259±0.00 N/A 16.073±5.60 N/A 7.065±0.00 N/A 30.415±15.72 13.963±0.00 11.227±4.18 7.249±0.00

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