C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051154 Commd3 10090 + 2:18672384-18676231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061158 Commd3-001 18672423-18676231 protein_coding
  ENSMUST00000130537 Commd3-008 18674347-18675923 processed_transcript
  ENSMUST00000131369 Commd3-006 18673658-18674397 processed_transcript
  ENSMUST00000133685 Commd3-003 18673961-18675928 processed_transcript
  ENSMUST00000133828 Commd3-004 18672435-18674635 processed_transcript
  ENSMUST00000137317 Commd3-011 18672523-18674400 processed_transcript
  ENSMUST00000137817 Commd3-007 18674085-18675981 processed_transcript
  ENSMUST00000150590 Commd3-009 18674424-18675006 processed_transcript
  ENSMUST00000151230 Commd3-010 18674649-18675501 processed_transcript
  ENSMUST00000151974 Commd3-002 18672433-18674692 processed_transcript
  ENSMUST00000154519 Commd3-005 18672436-18674512 processed_transcript
  ENSMUST00000171845 Commd3-201 18672384-18676230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061158ENSMUST00000133685ENSMUST00000133828ENSMUST00000137317ENSMUST00000137817ENSMUST00000151974ENSMUST00000154519ENSMUST00000171845
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061158 30.181±2.40 17.339±2.87 42.055±10.87 43.419±10.57 19.771±4.78 9.152±1.84 23.026±9.43 39.207±9.86 32.505±7.68 22.123±2.94 35.938±11.08 18.998±19.45 35.471±7.25 31.538±3.41
ENSMUST00000133685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.855±3.66 N/A
ENSMUST00000133828 N/A 202.835±40.54 N/A N/A 28.842±6.62 20.843±3.59 N/A 11.394±0.00 23.128±8.48 10.076±0.55 N/A 29.921±5.83 N/A N/A
ENSMUST00000137317 N/A N/A N/A 80.279±0.00 N/A N/A N/A N/A N/A N/A N/A 135.791±0.00 78.216±43.12 73.934±0.00
ENSMUST00000137817 N/A N/A N/A 12.718±0.00 N/A N/A N/A N/A N/A N/A N/A 22.963±0.00 N/A 9.344±0.00
ENSMUST00000151974 N/A N/A N/A N/A N/A N/A N/A N/A 22.813±0.00 N/A N/A 10.589±0.00 N/A N/A
ENSMUST00000154519 N/A N/A N/A N/A 8.034±0.00 5.248±0.00 N/A N/A N/A 5.343±0.21 N/A 7.249±0.17 N/A N/A
ENSMUST00000171845 N/A N/A 10.527±0.00 10.009±0.00 17.259±0.00 N/A 16.073±5.60 N/A 7.065±0.00 N/A 30.415±15.72 13.963±0.00 11.227±4.18 7.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000780 CIL_000780_0003 CGP 2:18672384-18686629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045402 commd3 COMM domain containing 3 protein_coding Danio_rerio
ENSG00000148444 COMMD3 COMM domain containing 3 protein_coding Homo_sapiens

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