C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 10 open reading frame 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148655 C10orf11 9606 + 10:75431453-76560167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372499 C10orf11-001 75782761-76557375 protein_coding
  ENST00000468134 C10orf11-005 76396501-76557326 processed_transcript
  ENST00000483375 C10orf11-002 76403221-76557356 processed_transcript
  ENST00000488655 C10orf11-004 76324401-76557306 processed_transcript
  ENST00000488759 C10orf11-003 76403221-76557352 processed_transcript
  ENST00000493194 C10orf11-008 76464814-76557340 processed_transcript
  ENST00000493690 C10orf11-009 76556387-76557357 processed_transcript
  ENST00000496424 C10orf11-012 76318334-76560167 protein_coding
  ENST00000593699 C10orf11-011 75647509-76557377 processed_transcript
  ENST00000593817 C10orf11-010 75601240-76036136 processed_transcript
  ENST00000595936 C10orf11-015 76470398-76557353 processed_transcript
  ENST00000596228 C10orf11-013 76402229-76557529 processed_transcript
  ENST00000597823 C10orf11-014 76402229-76557577 processed_transcript
  ENST00000598708 C10orf11-007 76324401-76557366 processed_transcript
  ENST00000611255 C10orf11-006 75431453-76557375 protein_coding
  ENST00000611306 C10orf11-201 76036006-76058789 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000488759ENST00000493690ENST00000496424ENST00000593699ENST00000593817ENST00000596228ENST00000598708ENST00000611255ENST00000611306
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000488759 N/A N/A N/A N/A N/A 7.678±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493690 N/A N/A 2.419±0.00 N/A N/A N/A N/A N/A N/A 0.866±0.00 99.299±0.00 N/A 4.159±1.65
ENST00000496424 N/A N/A 0.089±0.00 0.299±0.00 N/A N/A 0.252±0.00 0.259±0.00 0.361±0.13 N/A 0.274±0.00 N/A 0.155±0.02
ENST00000593699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00 N/A N/A
ENST00000593817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.013±0.00
ENST00000596228 N/A N/A N/A N/A N/A N/A 1.563±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598708 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A
ENST00000611255 4.992±0.00 6.923±0.00 1.109±0.45 9.626±0.00 4.943±0.00 2.001±1.40 3.763±0.93 2.956±1.08 4.567±2.63 0.670±0.00 6.201±3.03 6.133±0.28 2.706±1.79
ENST00000611306 4.504±0.00 7.029±0.00 1.053±0.00 N/A 4.009±0.00 N/A 4.555±0.00 N/A 4.726±0.00 N/A 4.036±0.00 4.807±1.47 1.661±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0008KK CIL_0008KK_0001 VISTA 10:75241252-75843906
CIL_0001IM CIL_0001IM_0001 CGP 10:75397830-76560167
CIL_0005E6 CIL_0005E6_0001 CGP 10:75431453-77638595

Gene Ontology
GO IDEvidence TypeGO Description
GO:0030318 IMP melanocyte differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057166 C13H10orf11 chromosome 10 open reading frame 11 protein_coding Danio_rerio
ENSMUSG00000063458 1700112E06Rik RIKEN cDNA 1700112E06 gene protein_coding Mus_musculus

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