C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005E6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148655-ENSG00000156113 CGP 9606 10:75431453-77638595
GeneTranscriptPositionBiotype
ENSG00000156113 (KCNMA1)
potassium large conductance calcium-activated channel, subfamily M, alpha member 1 		ENST00000286627 (KCNMA1-001) 76884881-77638595 protein_coding
ENST00000286628 (KCNMA1-009) 76884877-77637642 protein_coding
ENST00000354353 (KCNMA1-201) 76884878-77404025 protein_coding
ENST00000372403 (KCNMA1-004) 76877739-77637494 protein_coding
ENST00000372408 (KCNMA1-005) 76877597-77637453 protein_coding
ENST00000372421 (KCNMA1-002) 76877597-77637562 protein_coding
ENST00000372437 (KCNMA1-006) 76877597-77637447 protein_coding
ENST00000372440 (KCNMA1-003) 76877597-77637993 protein_coding
ENST00000372443 (KCNMA1-010) 76877597-77638369 protein_coding
ENST00000404771 (KCNMA1-008) 76877597-77637758 protein_coding
ENST00000404857 (KCNMA1-202) 76877869-77404025 protein_coding
ENST00000406533 (KCNMA1-203) 76884878-77404025 protein_coding
ENST00000428546 (KCNMA1-019) 77012198-77079524 protein_coding
ENST00000434208 (KCNMA1-011) 76884116-77110338 protein_coding
ENST00000450795 (KCNMA1-018) 76995284-77079550 protein_coding
ENST00000457953 (KCNMA1-007) 76877597-77637564 protein_coding
ENST00000468471 (KCNMA1-013) 76887465-76887910 processed_transcript
ENST00000475352 (KCNMA1-012) 76973993-77019063 processed_transcript
ENST00000480683 (KCNMA1-015) 77636199-77637993 protein_coding
ENST00000481070 (KCNMA1-014) 77636199-77637789 protein_coding
ENST00000484343 (KCNMA1-017) 77071235-77079550 processed_transcript
ENST00000484507 (KCNMA1-016) 77063692-77084717 processed_transcript
ENST00000604624 (KCNMA1-020) 76869601-77403984 protein_coding
ENST00000618048 (KCNMA1-204) 77636205-77637819 protein_coding
ENSG00000199592 (RNA5SP321)
RNA, 5S ribosomal pseudogene 321 		ENST00000362722 (RNA5SP321-201) 77587049-77587159 rRNA
ENSG00000215921 (AL731568.1)
 ENST00000401102 (AL731568.1-201) 75823686-75823778 miRNA
ENSG00000224500 (RP11-328K22.1)
 ENST00000413564 (RP11-328K22.1-001) 77313941-77315694 antisense
ENSG00000224948 (ATP5G1P8)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) pseudogene 8 		ENST00000416294 (ATP5G1P8-001) 76836568-76836861 processed_pseudogene
ENSG00000225497 (KCNMA1-AS2)
KCNMA1 antisense RNA 2 		ENST00000428936 (KCNMA1-AS2-001) 77147652-77150100 antisense
ENST00000430464 (KCNMA1-AS2-002) 77148292-77150100 antisense
ENSG00000225652 (KCNMA1-AS3)
KCNMA1 antisense RNA 3 		ENST00000418515 (KCNMA1-AS3-001) 77354404-77376613 antisense
ENSG00000228280 (RP11-367B6.2)
 ENST00000445111 (RP11-367B6.2-001) 75742740-75743755 sense_intronic
ENSG00000230575 (RP11-369F10.2)
 ENST00000412137 (RP11-369F10.2-001) 76437408-76438775 antisense
ENSG00000268659 (RP11-310J24.3)
 ENST00000595383 (RP11-310J24.3-001) 75642476-75643106 sense_intronic
ENSG00000269256 (RP11-325D15.2)
 ENST00000597938 (RP11-325D15.2-001) 76558350-76560994 antisense
ENSG00000277338 (AL589863.1)
 ENST00000622475 (AL589863.1-201) 75568543-75568639 miRNA
ENSG00000278992 (RP11-43N22.1)
 ENST00000622980 (RP11-43N22.1-001) 76270206-76270800 TEC
ENSG00000279814 (RP11-399K21.12)
 ENST00000623230 (RP11-399K21.12-001) 75450081-75451725 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0005E6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063458-ENSMUSG00000063142 CGP 10090 14:22019712-24004859
GeneTranscriptPositionBiotype
ENSMUSG00000059827 (Gm5670)
predicted gene 5670 		ENSMUST00000093546 (Gm5670-201) 22558082-22558453 processed_pseudogene
ENSMUSG00000063142 (Kcnma1)
potassium large conductance calcium-activated channel, subfamily M, alpha member 1 		ENSMUST00000065788 (Kcnma1-201) 23298694-23803304 protein_coding
ENSMUST00000074983 (Kcnma1-202) 23299395-23803304 protein_coding
ENSMUST00000100831 (Kcnma1-203) 23309015-23803304 protein_coding
ENSMUST00000112423 (Kcnma1-204) 23299395-23650189 protein_coding
ENSMUST00000163322 (Kcnma1-205) 23309015-23803304 protein_coding
ENSMUST00000172099 (Kcnma1-206) 23289431-23803304 protein_coding
ENSMUST00000177634 (Kcnma1-207) 23298694-23803304 protein_coding
ENSMUST00000179097 (Kcnma1-208) 23298694-23803304 protein_coding
ENSMUST00000179836 (Kcnma1-209) 23289431-23803304 protein_coding
ENSMUST00000188210 (Kcnma1-001) 23299395-24004859 protein_coding
ENSMUST00000188285 (Kcnma1-003) 23299381-24004205 protein_coding
ENSMUST00000188991 (Kcnma1-006) 23300021-24004125 protein_coding
ENSMUST00000190044 (Kcnma1-005) 23299891-24004205 protein_coding
ENSMUST00000190339 (Kcnma1-002) 24002656-24004298 protein_coding
ENSMUST00000190985 (Kcnma1-004) 23299891-24003977 nonsense_mediated_decay
ENSMUSG00000063458 (1700112E06Rik)
RIKEN cDNA 1700112E06 gene 		ENSMUST00000075639 (1700112E06Rik-001) 22019712-23056085 protein_coding
ENSMUST00000159107 (1700112E06Rik-005) 22310165-22584439 processed_transcript
ENSMUST00000159777 (1700112E06Rik-003) 22019848-22716410 protein_coding
ENSMUST00000161249 (1700112E06Rik-004) 22019821-22828775 protein_coding
ENSMUST00000162337 (1700112E06Rik-006) 22577727-22599268 processed_transcript
ENSMUST00000162540 (1700112E06Rik-002) 22019848-23056085 protein_coding
ENSMUSG00000068680 (Gm10248)
predicted gene 10248 		ENSMUST00000090409 (Gm10248-001) 23038194-23094571 antisense
ENSMUSG00000071567 (A830039N20Rik)
RIKEN cDNA A830039N20 gene 		ENSMUST00000145596 (A830039N20Rik-001) 23292291-23293643 lincRNA
ENSMUSG00000100100 (RP24-212L9.1)
predicted gene 29626 		ENSMUST00000187439 (RP24-212L9.1-002) 23560265-23564587 antisense
ENSMUST00000191517 (RP24-212L9.1-001) 23560248-23564589 antisense

Mus musculus Ensembl (GRCm38)

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Genes
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005E6_0001ENSG00000156113ENST00000286627ENST00000286628ENST00000354353ENST00000372403ENST00000372408ENST00000372421ENST00000372437ENST00000372440ENST00000372443ENST00000404771ENST00000404857ENST00000406533ENST00000428546ENST00000434208ENST00000450795ENST00000457953ENST00000468471ENST00000475352ENST00000480683ENST00000481070ENST00000484343ENST00000484507ENST00000604624ENST00000618048ENSG00000199592ENST00000362722ENSG00000215921ENST00000401102ENSG00000224500ENST00000413564ENSG00000224948ENST00000416294ENSG00000225497ENST00000428936ENST00000430464ENSG00000225652ENST00000418515ENSG00000228280ENST00000445111ENSG00000230575ENST00000412137ENSG00000268659ENST00000595383ENSG00000269256ENST00000597938ENSG00000277338ENST00000622475ENSG00000278992ENST00000622980ENSG00000279814ENST00000623230CIL_0005E6_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156113 ENST00000286627 1.900±0.00 N/A N/A N/A 4.038±1.55 13.497±5.68 0.324±0.00 1.292±0.00 6.802±4.55 2.495±0.00 3.372±0.00 1.558±1.19 0.786±0.38 4.574±0.00
ENST00000286628 N/A 7.969±0.00 N/A N/A N/A N/A N/A N/A N/A 0.712±0.00 N/A 1.223±0.00 1.725±1.02 0.782±0.00
ENST00000354353 N/A N/A N/A N/A 3.299±0.00 8.213±0.00 0.157±0.00 N/A 0.903±0.00 N/A 2.793±1.60 0.964±0.48 N/A 3.385±0.00
ENST00000372403 N/A N/A 0.382±0.00 N/A 5.640±0.00 7.428±0.00 N/A N/A 8.822±0.00 1.723±0.00 N/A N/A N/A N/A
ENST00000372408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372421 N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000372437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404857 N/A N/A N/A N/A N/A N/A N/A 1.771±0.00 N/A N/A N/A 0.469±0.00 N/A 1.340±0.00
ENST00000406533 N/A N/A N/A 3.138±0.00 N/A 8.060±0.00 0.035±0.00 1.295±0.00 N/A N/A N/A N/A N/A N/A
ENST00000428546 N/A N/A 1.431±0.00 N/A N/A N/A N/A 6.204±0.00 N/A N/A 5.422±0.00 N/A N/A N/A
ENST00000434208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.633±0.00 N/A N/A N/A
ENST00000450795 N/A N/A 1.248±0.00 N/A N/A N/A N/A N/A N/A 2.397±0.00 N/A N/A N/A N/A
ENST00000457953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604624 N/A N/A N/A 6.842±3.85 N/A N/A 0.017±0.00 N/A N/A N/A 0.694±0.44 N/A 0.230±0.00 N/A
ENST00000618048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199592 ENST00000362722 N/A N/A N/A N/A N/A 18.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215921 ENST00000401102 N/A 0.202±0.00 N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00
ENSG00000224500 ENST00000413564 N/A 0.049±0.00 N/A 0.335±0.31 0.542±0.00 0.085±0.00 N/A 0.102±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224948 ENST00000416294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A
ENSG00000225497 ENST00000428936 N/A N/A N/A N/A 0.276±0.00 1.648±0.00 N/A N/A N/A N/A N/A N/A N/A 1.752±0.00
ENST00000430464 N/A N/A N/A 0.108±0.00 N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000225652 ENST00000418515 N/A N/A N/A 0.038±0.00 0.018±0.00 N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.972±0.31
ENSG00000228280 ENST00000445111 N/A 0.082±0.00 N/A N/A 0.106±0.00 N/A 0.076±0.03 N/A N/A N/A N/A 0.296±0.13 N/A 0.780±0.55
ENSG00000230575 ENST00000412137 N/A 0.172±0.00 N/A 0.856±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00
ENSG00000268659 ENST00000595383 N/A 0.043±0.00 N/A 0.023±0.00 0.859±0.00 0.526±0.00 0.039±0.00 1.245±0.00 0.138±0.10 1.144±0.00 N/A 0.058±0.00 N/A N/A
ENSG00000269256 ENST00000597938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A
ENSG00000277338 ENST00000622475 N/A 0.263±0.00 N/A N/A N/A N/A N/A 189.870±0.00 N/A N/A N/A 1.063±0.00 N/A N/A
ENSG00000278992 ENST00000622980 0.073±0.00 N/A 0.115±0.00 N/A 0.089±0.00 N/A 0.711±0.00 0.116±0.00 0.345±0.00 0.121±0.00 N/A N/A N/A 0.094±0.00
ENSG00000279814 ENST00000623230 0.014±0.00 0.069±0.00 1.691±0.00 0.096±0.07 0.522±0.50 0.630±0.61 0.144±0.06 0.374±0.34 0.385±0.37 1.996±0.00 N/A 0.317±0.51 0.040±0.00 0.039±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000059827 ENSMUST00000093546 0.957±0.00 0.524±0.00 0.211±0.02 N/A N/A 0.405±0.01 0.162±0.00 0.317±0.09 0.066±0.04 N/A N/A N/A 0.034±0.01 N/A
ENSMUSG00000063142 ENSMUST00000065788 N/A N/A N/A N/A 0.350±0.00 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000074983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00
ENSMUST00000100831 N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A 0.013±0.00 N/A 1.740±0.18 N/A N/A 0.349±0.00
ENSMUST00000112423 N/A N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A 6.008±0.00 N/A N/A
ENSMUST00000163322 0.700±0.49 N/A 3.831±0.00 N/A 1.189±0.60 3.855±1.44 N/A 0.333±0.17 0.031±0.03 0.288±0.00 N/A 8.409±2.07 0.018±0.01 0.512±0.28
ENSMUST00000172099 N/A N/A N/A N/A N/A N/A N/A 0.363±0.12 N/A N/A N/A N/A N/A N/A
ENSMUST00000177634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179097 N/A N/A N/A 5.133±0.00 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179836 0.169±0.00 N/A N/A N/A N/A N/A N/A 0.137±0.00 0.011±0.01 N/A N/A N/A 0.005±0.00 N/A
ENSMUST00000188210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.992±0.00 N/A N/A N/A
ENSMUST00000188285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188991 1.117±0.00 N/A N/A 1.476±0.00 N/A 4.045±1.37 0.107±0.00 0.241±0.00 0.003±0.00 0.330±0.00 N/A 4.761±0.91 N/A 0.412±0.00
ENSMUST00000190044 0.512±0.00 N/A 6.810±0.77 4.456±0.00 N/A 3.107±1.29 0.096±0.00 0.224±0.00 N/A 0.228±0.00 1.565±0.33 4.337±1.70 N/A 0.188±0.13
ENSMUST00000190339 N/A 8.693±1.69 N/A N/A 0.695±0.00 N/A N/A N/A 0.011±0.01 N/A N/A 8.482±1.52 N/A N/A
ENSMUST00000190985 N/A 11.091±2.68 N/A N/A 0.644±0.16 4.441±2.00 0.154±0.01 0.257±0.00 N/A 0.466±0.17 N/A N/A 0.012±0.00 0.414±0.00
ENSMUSG00000063458 ENSMUST00000075639 2.522±1.06 0.569±0.21 0.685±0.37 0.016±0.00 1.276±0.50 0.094±0.03 0.220±0.00 0.991±0.21 0.141±0.03 0.540±0.27 0.975±0.23 1.482±0.81 0.191±0.16 0.740±0.40
ENSMUST00000159107 N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159777 0.762±0.06 N/A N/A N/A N/A N/A N/A N/A 0.369±0.06 N/A N/A 0.421±0.18 N/A 0.907±0.00
ENSMUST00000161249 N/A 1.106±0.19 1.096±0.00 0.261±0.00 1.465±0.24 0.544±0.36 0.175±0.05 1.400±0.06 0.574±0.34 N/A N/A 1.851±0.78 0.238±0.10 N/A
ENSMUST00000162337 N/A 0.124±0.00 N/A 0.057±0.02 0.400±0.05 0.202±0.09 0.048±0.02 0.257±0.08 0.079±0.04 0.155±0.08 0.472±0.10 0.353±0.19 0.025±0.02 0.173±0.07
ENSMUST00000162540 2.530±0.83 N/A N/A 0.107±0.10 0.545±0.00 N/A 0.070±0.05 0.540±0.16 0.554±0.00 N/A N/A 1.090±0.65 0.188±0.14 N/A
ENSMUSG00000068680 ENSMUST00000090409 0.017±0.00 N/A 0.032±0.00 0.065±0.03 N/A N/A N/A N/A N/A N/A N/A 0.104±0.07 0.004±0.00 0.029±0.02
ENSMUSG00000071567 ENSMUST00000145596 0.143±0.10 0.900±0.20 3.818±0.31 26.376±0.00 0.506±0.29 0.716±0.11 0.023±0.00 0.094±0.05 0.038±0.03 0.126±0.08 6.624±2.77 0.748±0.31 0.035±0.03 0.092±0.07
ENSMUSG00000100100 ENSMUST00000187439 N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A N/A N/A
ENSMUST00000191517 N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A

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