C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149260 CAPN5 9606 + 11:77066932-77126155 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278559 CAPN5-001 77066941-77126155 protein_coding
  ENST00000456580 CAPN5-004 77066993-77124495 protein_coding
  ENST00000527066 CAPN5-007 77066971-77093807 protein_coding
  ENST00000527129 CAPN5-005 77119407-77124495 retained_intron
  ENST00000529629 CAPN5-003 77066977-77124054 protein_coding
  ENST00000531028 CAPN5-006 77066932-77123916 protein_coding
  ENST00000533889 CAPN5-009 77084965-77112911 retained_intron
  ENST00000615896 CAPN5-201 77067005-77124199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278559ENST00000456580ENST00000527066ENST00000527129ENST00000529629ENST00000533889ENST00000615896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278559 1.631±0.00 1.024±0.00 N/A 1.745±1.19 1.992±0.06 3.891±2.11 0.410±0.00 4.148±0.49 1.840±0.00 0.800±0.00 N/A 10.525±3.21 1.877±0.71 6.950±2.74
ENST00000456580 N/A 1.463±0.00 0.518±0.00 1.517±0.90 1.314±0.23 3.647±0.00 N/A 4.295±0.00 2.633±1.71 0.708±0.37 0.203±0.00 7.087±4.19 N/A 3.962±0.00
ENST00000527066 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A
ENST00000527129 N/A N/A N/A N/A 1.806±0.00 2.468±0.00 N/A N/A N/A N/A 0.238±0.00 0.782±0.00 N/A N/A
ENST00000529629 N/A N/A N/A N/A 1.341±0.00 N/A 0.244±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000533889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.665±0.00 N/A N/A N/A
ENST00000615896 1.836±0.00 N/A N/A N/A N/A 2.592±0.00 0.291±0.06 2.954±0.00 N/A 0.935±0.00 0.425±0.00 7.426±5.28 2.408±0.00 8.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SU CIL_0001SU_0003 CGP 11:77066932-77126155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IEA:IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0005925 IDA focal adhesion
GO:0006508 IEA:IBA proteolysis
GO:0007165 TAS signal transduction
GO:0009986 IDA cell surface
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069717 capn5a calpain 5a protein_coding Danio_rerio
ENSDARG00000069748 capn5b calpain 5b protein_coding Danio_rerio
ENSMUSG00000035547 Capn5 calpain 5 protein_coding Mus_musculus

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