C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278559 CAPN5-001 ENSG00000149260 9606 + 11:77066941-77126155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000278559
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000278559 1.631±0.00 1.024±0.00 1.745±1.19 1.992±0.06 3.891±2.11 0.410±0.00 4.148±0.49 1.840±0.00 0.800±0.00 10.525±3.21 1.877±0.71 6.950±2.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SU CIL_0001SU_0003 CGP 11:77066932-77126155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IEA:IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0005925 IDA focal adhesion
GO:0006508 IEA:IBA proteolysis
GO:0007165 TAS signal transduction
GO:0009986 IDA cell surface
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040971 Capn5-001 protein_coding Mus_musculus 0 2483
ENSMUST00000107112 Capn5-002 protein_coding Mus_musculus 0 2403
ENSDART00000101732 capn5b-001 protein_coding Danio_rerio 0 697
ENSMUST00000134638 Capn5-005 processed_transcript Mus_musculus 0 355

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