C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035547 Capn5 10090 - 7:98121559-98178274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040971 Capn5-001 98121559-98178274 protein_coding
  ENSMUST00000107112 Capn5-002 98123661-98162342 protein_coding
  ENSMUST00000129430 Capn5-003 98161998-98165441 protein_coding
  ENSMUST00000134638 Capn5-005 98145516-98162210 processed_transcript
  ENSMUST00000155056 Capn5-004 98161981-98164962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040971ENSMUST00000107112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040971 6.617±3.82 3.634±1.43 15.811±0.81 6.211±2.69 7.162±3.08 20.580±8.30 0.928±0.38 4.650±0.83 5.532±6.20 9.550±0.27 0.263±0.14 14.150±4.71 2.461±2.18 0.387±0.25
ENSMUST00000107112 N/A 1.970±0.23 N/A 5.127±0.00 4.424±0.28 35.735±11.01 N/A N/A 0.380±0.08 N/A 0.103±0.00 4.951±1.18 1.099±0.63 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SU CIL_0001SU_0004 CGP 7:98121559-98178274

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005737 IBA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006508 IBA proteolysis
GO:0009986 ISS cell surface
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069717 capn5a calpain 5a protein_coding Danio_rerio
ENSDARG00000069748 capn5b calpain 5b protein_coding Danio_rerio
ENSG00000149260 CAPN5 calpain 5 protein_coding Homo_sapiens

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