C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 8, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000150394 CDH8 9606 - 16:61647242-62037035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299345 CDH8-013 61647242-62036835 protein_coding
  ENST00000577228 CDH8-004 61901392-61918714 processed_transcript
  ENST00000577390 CDH8-001 61647242-62036835 protein_coding
  ENST00000577536 CDH8-009 61710749-61714271 processed_transcript
  ENST00000577730 CDH8-012 61647242-62021602 protein_coding
  ENST00000580044 CDH8-008 61667179-61714284 processed_transcript
  ENST00000582242 CDH8-007 61789476-61818043 retained_intron
  ENST00000582980 CDH8-006 62031991-62036432 processed_transcript
  ENST00000583382 CDH8-011 61817479-62035134 protein_coding
  ENST00000583483 CDH8-010 61655560-61714058 processed_transcript
  ENST00000584337 CDH8-003 61725166-62036402 protein_coding
  ENST00000584506 CDH8-002 62021160-62037035 protein_coding
  ENST00000584966 CDH8-005 61901130-62021379 retained_intron
  ENST00000585315 CDH8-014 61647242-62036312 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299345ENST00000577228ENST00000577390ENST00000577536ENST00000577730ENST00000582980ENST00000583382ENST00000584337ENST00000584506ENST00000584966ENST00000585315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299345 N/A N/A N/A 1.391±0.00 N/A 0.033±0.00 N/A N/A N/A 0.048±0.03 N/A 0.045±0.01 N/A N/A
ENST00000577228 0.302±0.00 0.190±0.00 0.199±0.00 N/A 1.022±0.54 0.672±0.12 0.300±0.08 0.330±0.13 0.043±0.00 2.021±0.00 N/A N/A N/A 0.737±0.00
ENST00000577390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A
ENST00000577536 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A
ENST00000577730 0.024±0.00 0.022±0.00 N/A N/A N/A N/A N/A 0.012±0.00 0.001±0.00 0.007±0.00 0.009±0.00 N/A N/A N/A
ENST00000582980 N/A N/A N/A N/A N/A 1.137±0.00 N/A N/A N/A N/A N/A 1.448±0.00 N/A N/A
ENST00000583382 N/A N/A N/A 5.310±0.00 N/A N/A 0.101±0.00 N/A 0.335±0.00 0.417±0.00 N/A 0.319±0.00 0.669±0.00 N/A
ENST00000584337 N/A N/A N/A 1.763±0.00 0.035±0.00 0.057±0.01 0.018±0.01 N/A N/A N/A N/A 0.280±0.31 1.231±0.51 N/A
ENST00000584506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.225±0.00 0.727±0.00 N/A N/A
ENST00000584966 N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00 N/A N/A N/A N/A N/A
ENST00000585315 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.037±0.00 N/A N/A 0.014±0.00 N/A 0.024±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 IEA synaptic transmission
GO:0009409 IEA response to cold
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0043083 IEA synaptic cleft
GO:0043679 IEA axon terminus
GO:0045216 TAS cell-cell junction organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037478 CDH8 cadherin 8, type 2 protein_coding Danio_rerio
ENSMUSG00000036510 Cdh8 cadherin 8 protein_coding Mus_musculus

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