C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151665 PIGF 9606 - 2:46580937-46617119 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281382 PIGF-001 46580937-46617119 protein_coding
  ENST00000306465 PIGF-002 46581285-46617051 protein_coding
  ENST00000412717 PIGF-004 46581416-46617055 nonsense_mediated_decay
  ENST00000420164 PIGF-007 46581285-46612274 nonsense_mediated_decay
  ENST00000474980 PIGF-006 46615018-46617037 protein_coding
  ENST00000482786 PIGF-005 46581285-46588622 processed_transcript
  ENST00000495933 PIGF-003 46612228-46617030 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281382
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281382 22.987±0.00 9.553±1.10 25.005±11.01 15.087±4.21 43.998±0.00 9.902±5.86 3.593±0.00 13.438±5.07 19.573±1.59 14.454±6.08 15.184±0.72 20.417±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NS CIL_0001NS_0001 CGP 2:46490750-46583121
CIL_0001ND CIL_0001ND_0001 CGP 2:46541806-46617119
CIL_0001NE CIL_0001NE_0001 CGP 2:46580937-46625742

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004307 TAS ethanolaminephosphotransferase activity
GO:0005789 ISS:IEA endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 ISS:IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032780 pigf phosphatidylinositol glycan, class F protein_coding Danio_rerio
ENSMUSG00000024145 Pigf phosphatidylinositol glycan anchor biosynthesis, class F protein_coding Mus_musculus

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