C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281382 PIGF-001 ENSG00000151665 9606 - 2:46580937-46617119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281382
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281382 22.987±0.00 9.553±1.10 25.005±11.01 15.087±4.21 43.998±0.00 9.902±5.86 3.593±0.00 13.438±5.07 19.573±1.59 14.454±6.08 15.184±0.72 20.417±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NS CIL_0001NS_0001 CGP 2:46490750-46583121
CIL_0001ND CIL_0001ND_0001 CGP 2:46541806-46617119
CIL_0001NE CIL_0001NE_0001 CGP 2:46580937-46625742

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004307 TAS ethanolaminephosphotransferase activity
GO:0005789 ISS:IEA endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 ISS:IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024957 Pigf-001 protein_coding Mus_musculus 0 1011
ENSMUST00000024956 Rhoq-001 protein_coding Mus_musculus 0 749

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