C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001ND_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119729-ENSG00000151665 CGP 9606 2:46541806-46617119
GeneTranscriptPositionBiotype
ENSG00000119729 (RHOQ)
ras homolog family member Q
ENST00000238738 (RHOQ-001) 46542728-46583121 protein_coding
ENST00000432183 (RHOQ-003) 46542736-46576656 nonsense_mediated_decay
ENST00000465198 (RHOQ-004) 46541806-46576249 processed_transcript
ENST00000473428 (RHOQ-007) 46543767-46581318 nonsense_mediated_decay
ENST00000482449 (RHOQ-002) 46543400-46576656 protein_coding
ENST00000489448 (RHOQ-008) 46580284-46581046 retained_intron
ENST00000489471 (RHOQ-006) 46543149-46581270 nonsense_mediated_decay
ENST00000494370 (RHOQ-005) 46576128-46577125 retained_intron
ENST00000616091 (RHOQ-201) 46543021-46581083 protein_coding
ENSG00000119878 (CRIPT)
cysteine-rich PDZ-binding protein
ENST00000238892 (CRIPT-001) 46617151-46625742 protein_coding
ENST00000486447 (CRIPT-002) 46616416-46625053 processed_transcript
ENSG00000151665 (PIGF)
phosphatidylinositol glycan anchor biosynthesis, class F
ENST00000281382 (PIGF-001) 46580937-46617119 protein_coding
ENST00000306465 (PIGF-002) 46581285-46617051 protein_coding
ENST00000412717 (PIGF-004) 46581416-46617055 nonsense_mediated_decay
ENST00000420164 (PIGF-007) 46581285-46612274 nonsense_mediated_decay
ENST00000474980 (PIGF-006) 46615018-46617037 protein_coding
ENST00000482786 (PIGF-005) 46581285-46588622 processed_transcript
ENST00000495933 (PIGF-003) 46612228-46617030 processed_transcript
ENSG00000250116 (RP11-417F21.1)
ENST00000506009 (RP11-417F21.1-001) 46568256-46580238 antisense
ENSG00000250565 (ATP6V1E2)
ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
ENST00000306448 (ATP6V1E2-001) 46511847-46519957 protein_coding
ENST00000505245 (ATP6V1E2-003) 46534300-46542002 processed_transcript
ENST00000522219 (ATP6V1E2-006) 46535813-46541589 processed_transcript
ENST00000522587 (ATP6V1E2-002) 46511867-46542557 protein_coding
ENST00000524188 (ATP6V1E2-004) 46527878-46541583 processed_transcript
ENST00000524249 (ATP6V1E2-005) 46490750-46542178 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0001ND_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024143-ENSMUSG00000024145 CGP 10090 17:86963082-87025406
GeneTranscriptPositionBiotype
ENSMUSG00000024143 (Rhoq)
ras homolog gene family, member Q
ENSMUST00000024956 (Rhoq-001) 86963082-87000069 protein_coding
ENSMUST00000139344 (Rhoq-002) 86963292-86995098 protein_coding
ENSMUSG00000024145 (Pigf)
phosphatidylinositol glycan anchor biosynthesis, class F
ENSMUST00000024957 (Pigf-001) 86997256-87025406 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ND_0001ENSG00000119729ENST00000238738ENST00000432183ENST00000465198ENST00000473428ENST00000482449ENST00000489448ENST00000489471ENST00000494370ENST00000616091ENSG00000119878ENST00000238892ENST00000486447ENSG00000151665ENST00000281382ENST00000306465ENST00000412717ENST00000420164ENST00000474980ENST00000482786ENST00000495933ENSG00000250116ENST00000506009ENSG00000250565ENST00000306448ENST00000505245ENST00000522219ENST00000522587ENST00000524188ENST00000524249CIL_0001ND_0002ENSMUSG00000024143ENSMUST00000024956ENSMUST00000139344ENSMUSG00000024145ENSMUST00000024957
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ND_0001ENSG00000119729ENST00000238738ENST00000616091ENSG00000119878ENST00000238892ENST00000486447ENSG00000151665ENST00000281382ENSG00000250116ENST00000506009ENSG00000250565ENST00000306448ENST00000522587CIL_0001ND_0002ENSMUSG00000024143ENSMUST00000024956ENSMUST00000139344ENSMUSG00000024145ENSMUST00000024957
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119729 ENST00000238738 25.942±0.00 13.416±0.00 N/A 16.179±0.00 28.274±22.40 14.626±10.63 43.043±29.64 16.132±0.00 3.537±0.00 24.857±0.00 18.356±8.47 10.370±4.11 10.641±2.02 16.262±0.00
ENST00000432183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616091 N/A N/A N/A N/A N/A N/A N/A N/A 20.363±0.00 7.792±0.00 N/A N/A 20.052±0.00 N/A
ENSG00000119878 ENST00000238892 N/A N/A 1.781±0.00 4.969±0.42 N/A N/A N/A N/A 5.571±0.00 3.402±0.00 N/A 3.330±0.00 N/A N/A
ENST00000486447 N/A N/A N/A 7.015±0.00 N/A N/A N/A N/A 4.037±0.00 N/A N/A N/A N/A N/A
ENSG00000151665 ENST00000281382 22.987±0.00 N/A N/A 9.553±1.10 25.005±11.01 15.087±4.21 43.998±0.00 9.902±5.86 3.593±0.00 13.438±5.07 19.573±1.59 14.454±6.08 15.184±0.72 20.417±0.00
ENST00000306465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250116 ENST00000506009 0.398±0.00 0.338±0.00 N/A 0.246±0.10 0.104±0.00 0.064±0.00 0.423±0.27 0.130±0.02 N/A 0.648±0.00 0.108±0.00 0.160±0.02 0.035±0.00 2.989±1.45
ENSG00000250565 ENST00000306448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.074±0.00
ENST00000505245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.965±0.00
ENST00000524188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024143 ENSMUST00000024956 44.454±2.93 24.597±1.43 13.092±6.88 5.561±1.08 36.696±4.33 14.769±1.19 34.426±1.85 14.205±1.22 1.882±0.78 16.503±2.87 30.676±11.18 15.924±4.24 4.459±1.57 1.578±0.00
ENSMUST00000139344 N/A 28.561±4.14 N/A N/A N/A N/A N/A N/A 1.301±0.00 13.213±0.00 N/A 14.299±4.95 N/A N/A
ENSMUSG00000024145 ENSMUST00000024957 N/A N/A 20.892±1.54 9.898±3.91 N/A N/A N/A 9.724±1.08 6.062±3.69 N/A N/A 9.220±3.39 10.025±3.74 53.541±24.64

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