C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuroblastoma amplified sequence
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151779 NBAS 9606 - 2:15166909-15561330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281513 NBAS-001 15166909-15561330 protein_coding
  ENST00000417461 NBAS-003 15166914-15238686 protein_coding
  ENST00000423602 NBAS-006 15177949-15190397 protein_coding
  ENST00000427792 NBAS-009 15478245-15511303 nonsense_mediated_decay
  ENST00000429842 NBAS-007 15393639-15417581 protein_coding
  ENST00000433283 NBAS-005 15166916-15190403 protein_coding
  ENST00000441755 NBAS-008 15374608-15424392 protein_coding
  ENST00000442506 NBAS-002 15166916-15424394 protein_coding
  ENST00000485694 NBAS-004 15166917-15180378 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281513ENST00000417461ENST00000433283ENST00000442506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281513 3.853±0.00 1.391±0.00 2.360±0.00 4.038±0.30 4.012±0.70 2.294±1.40 4.512±1.43 2.395±0.00 1.384±0.63 1.856±0.25 3.440±2.69 2.627±1.83 2.450±0.74 5.854±0.07
ENST00000417461 N/A 4.727±0.00 N/A N/A 4.453±0.00 N/A N/A 3.962±0.00 3.166±0.00 3.745±0.00 7.839±0.00 5.699±0.00 N/A 9.353±0.00
ENST00000433283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.070±0.53 9.085±1.25 39.233±0.00
ENST00000442506 2.436±0.00 2.781±0.00 N/A 2.735±0.00 3.488±0.00 3.455±0.00 2.843±0.00 3.408±0.00 1.325±0.00 1.454±0.00 3.208±1.06 5.044±1.17 2.335±0.05 7.622±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001Y CIL_00001Y_0002 CGP 2:14632686-15561330
CIL_00001Z CIL_00001Z_0002 CGP 2:15166909-15631111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000956 IMP nuclear-transcribed mRNA catabolic process
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:2000623 IMP negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008593 nbas neuroblastoma amplified sequence protein_coding Danio_rerio
ENSMUSG00000020576 Nbas neuroblastoma amplified sequence protein_coding Mus_musculus

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