C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008593-ENSDARG00000032117 CGP 7955 20:32877348-33228744
GeneTranscriptPositionBiotype
ENSDARG00000008593 (nbas)
neuroblastoma amplified sequence 		ENSDART00000047834 (nbas-001) 32877348-33213780 protein_coding
ENSDART00000138708 (nbas-002) 33001537-33019934 protein_coding
ENSDARG00000032117 (ddx1)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 		ENSDART00000023963 (ddx1-201) 33214105-33228744 protein_coding
ENSDART00000131785 (ddx1-001) 33214224-33228533 protein_coding
CIL_00001Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151779-ENSG00000079785 CGP 9606 2:15166909-15631111
GeneTranscriptPositionBiotype
ENSG00000079785 (DDX1)
DEAD (Asp-Glu-Ala-Asp) box helicase 1 		ENST00000233084 (DDX1-201) 15591621-15631109 protein_coding
ENST00000381341 (DDX1-001) 15591178-15631111 protein_coding
ENST00000434671 (DDX1-002) 15591483-15595177 protein_coding
ENST00000459706 (DDX1-003) 15617305-15621387 retained_intron
ENST00000470674 (DDX1-005) 15621092-15628736 retained_intron
ENST00000478695 (DDX1-004) 15623533-15627557 retained_intron
ENST00000617198 (DDX1-202) 15591851-15631100 protein_coding
ENST00000621973 (DDX1-203) 15599153-15631109 protein_coding
ENSG00000151779 (NBAS)
neuroblastoma amplified sequence 		ENST00000281513 (NBAS-001) 15166909-15561330 protein_coding
ENST00000417461 (NBAS-003) 15166914-15238686 protein_coding
ENST00000423602 (NBAS-006) 15177949-15190397 protein_coding
ENST00000427792 (NBAS-009) 15478245-15511303 nonsense_mediated_decay
ENST00000429842 (NBAS-007) 15393639-15417581 protein_coding
ENST00000433283 (NBAS-005) 15166916-15190403 protein_coding
ENST00000441755 (NBAS-008) 15374608-15424392 protein_coding
ENST00000442506 (NBAS-002) 15166916-15424394 protein_coding
ENST00000485694 (NBAS-004) 15166917-15180378 retained_intron
ENSG00000229087 (RP11-32P22.1)
 ENST00000413892 (RP11-32P22.1-001) 15397435-15397782 processed_pseudogene
ENSG00000234022 (AC008278.2)
 ENST00000438178 (AC008278.2-001) 15564170-15573868 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001Z_0001ENSDARG00000008593ENSDART00000047834ENSDART00000138708ENSDARG00000032117ENSDART00000023963ENSDART00000131785CIL_00001Z_0002ENSG00000079785ENST00000233084ENST00000381341ENST00000434671ENST00000459706ENST00000470674ENST00000478695ENST00000617198ENST00000621973ENSG00000151779ENST00000281513ENST00000417461ENST00000423602ENST00000427792ENST00000429842ENST00000433283ENST00000441755ENST00000442506ENST00000485694ENSG00000229087ENST00000413892ENSG00000234022ENST00000438178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001Z_0001ENSDARG00000008593ENSDART00000047834ENSDART00000138708ENSDARG00000032117ENSDART00000023963ENSDART00000131785CIL_00001Z_0002ENSG00000079785ENST00000233084ENST00000381341ENST00000617198ENST00000621973ENSG00000151779ENST00000281513ENST00000417461ENST00000433283ENST00000442506ENSG00000229087ENST00000413892ENSG00000234022ENST00000438178
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008593 ENSDART00000047834 N/A N/A N/A 1.104±0.45 N/A N/A 1.311±0.31 2.665±0.00 0.419±0.00 N/A 0.542±0.00 N/A N/A N/A
ENSDART00000138708 N/A N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000032117 ENSDART00000023963 N/A N/A N/A 9.771±5.88 N/A N/A 8.795±4.62 6.697±4.69 0.480±0.00 N/A 6.157±0.00 N/A N/A N/A
ENSDART00000131785 N/A N/A N/A 3.291±0.00 N/A N/A 2.720±0.00 N/A 1.152±0.00 N/A 1.109±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079785 ENST00000233084 21.340±0.00 14.991±0.00 7.387±0.00 31.100±10.86 14.700±7.49 18.548±6.06 19.206±8.60 14.935±3.99 8.814±2.38 6.756±0.58 18.039±9.84 16.506±15.69 20.892±16.45 37.621±14.29
ENST00000381341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.118±0.00 N/A N/A
ENST00000434671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617198 N/A N/A N/A 6.461±0.00 N/A N/A N/A N/A N/A N/A 9.004±0.00 8.563±0.00 N/A 8.023±0.00
ENST00000621973 10.508±0.00 15.592±0.00 N/A N/A 18.002±0.00 9.520±0.00 7.709±0.00 20.764±0.00 9.973±0.00 6.863±0.00 N/A 17.362±0.00 13.538±1.59 12.586±0.00
ENSG00000151779 ENST00000281513 3.853±0.00 1.391±0.00 2.360±0.00 4.038±0.30 4.012±0.70 2.294±1.40 4.512±1.43 2.395±0.00 1.384±0.63 1.856±0.25 3.440±2.69 2.627±1.83 2.450±0.74 5.854±0.07
ENST00000417461 N/A 4.727±0.00 N/A N/A 4.453±0.00 N/A N/A 3.962±0.00 3.166±0.00 3.745±0.00 7.839±0.00 5.699±0.00 N/A 9.353±0.00
ENST00000423602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.070±0.53 9.085±1.25 39.233±0.00
ENST00000441755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442506 2.436±0.00 2.781±0.00 N/A 2.735±0.00 3.488±0.00 3.455±0.00 2.843±0.00 3.408±0.00 1.325±0.00 1.454±0.00 3.208±1.06 5.044±1.17 2.335±0.05 7.622±0.00
ENST00000485694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229087 ENST00000413892 N/A N/A N/A 0.100±0.00 N/A 0.588±0.00 0.873±0.00 N/A N/A 0.090±0.00 N/A N/A N/A N/A
ENSG00000234022 ENST00000438178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 0.349±0.00

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