Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	gem (nuclear organelle) associated protein 6
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000152147	GEMIN6	9606	+	2:38751534-38785000	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000281950		GEMIN6-001	38778185-38785000	protein_coding
	ENST00000409011		GEMIN6-003	38751534-38781965	protein_coding
	ENST00000409566		GEMIN6-002	38778210-38781947	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000281950	1.027±0.00	1.878±0.00	0.432±0.00	1.160±0.10	1.041±0.24	0.825±0.04	0.444±0.03	0.949±0.61	0.835±0.21	1.245±0.00	0.413±0.05	1.661±0.80	0.817±0.38	2.955±1.00
ENST00000409566	2.042±0.00	4.677±0.00	1.285±0.00	1.804±0.31	2.440±1.43	3.485±2.69	1.318±0.27	3.587±2.32	3.791±2.23	2.528±0.00	1.744±1.23	10.715±11.14	7.240±4.49	25.450±12.49

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00067T	CIL_00067T_0001	CGP	2:38751534-38875934

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000245	IEA	spliceosomal complex assembly
GO:0000387	TAS	spliceosomal snRNP assembly
GO:0000398	TAS	mRNA splicing, via spliceosome
GO:0005515	IPI	protein binding
GO:0005634	IEA	nucleus
GO:0005654	IDA	nucleoplasm
GO:0005737	IDA	cytoplasm
GO:0005829	IDA	cytosol
GO:0010467	TAS	gene expression
GO:0016070	TAS	RNA metabolic process
GO:0016604	IDA	nuclear body
GO:0032797	IDA	SMN complex
GO:0034660	TAS	ncRNA metabolic process
GO:0034719	IDA	SMN-Sm protein complex

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000090806	GEMIN6	gem (nuclear organelle) associated protein 6	protein_coding	Danio_rerio
ENSMUSG00000055760	Gemin6	gem (nuclear organelle) associated protein 6	protein_coding	Mus_musculus

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