C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281950 GEMIN6-001 ENSG00000152147 9606 + 2:38778185-38785000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281950 1.027±0.00 1.878±0.00 0.432±0.00 1.160±0.10 1.041±0.24 0.825±0.04 0.444±0.03 0.949±0.61 0.835±0.21 1.245±0.00 0.413±0.05 1.661±0.80 0.817±0.38 2.955±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067T CIL_00067T_0001 CGP 2:38751534-38875934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000245 IEA spliceosomal complex assembly
GO:0000387 TAS spliceosomal snRNP assembly
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016604 IDA nuclear body
GO:0032797 IDA SMN complex
GO:0034660 TAS ncRNA metabolic process
GO:0034719 IDA SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000002 69

Loading