C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA cross-link repair 1C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152457 DCLRE1C 9606 - 10:14897359-14954432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357717 DCLRE1C-002 14908166-14954058 protein_coding
  ENST00000378241 DCLRE1C-013 14934445-14954018 protein_coding
  ENST00000378242 DCLRE1C-010 14908188-14923675 protein_coding
  ENST00000378246 DCLRE1C-001 14907879-14954095 protein_coding
  ENST00000378249 DCLRE1C-003 14908171-14954048 protein_coding
  ENST00000378254 DCLRE1C-006 14908171-14954048 protein_coding
  ENST00000378255 DCLRE1C-005 14908171-14954048 protein_coding
  ENST00000378258 DCLRE1C-007 14908171-14954072 protein_coding
  ENST00000378278 DCLRE1C-009 14908171-14954048 protein_coding
  ENST00000378289 DCLRE1C-008 14897359-14954432 protein_coding
  ENST00000396817 DCLRE1C-004 14908171-14954048 protein_coding
  ENST00000418843 DCLRE1C-011 14928143-14954031 protein_coding
  ENST00000456122 DCLRE1C-012 14934723-14954019 protein_coding
  ENST00000489161 DCLRE1C-015 14919796-14928062 processed_transcript
  ENST00000489845 DCLRE1C-016 14909170-14911322 processed_transcript
  ENST00000492201 DCLRE1C-014 14908742-14928082 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000378246ENST00000378258ENST00000378278ENST00000378289ENST00000418843ENST00000492201
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000378246 1.195±0.00 N/A 0.479±0.12 0.878±0.00 1.044±0.00 0.368±0.00 0.317±0.00 0.985±0.00 0.223±0.15 N/A 1.156±0.00
ENST00000378258 N/A 0.711±0.00 N/A N/A N/A 0.383±0.02 N/A 0.830±0.00 N/A N/A 0.910±0.00
ENST00000378278 N/A N/A 0.438±0.00 1.365±0.00 1.752±0.00 N/A 1.584±0.00 0.644±0.00 N/A N/A 0.848±0.00
ENST00000378289 N/A N/A N/A N/A 0.931±0.00 0.214±0.00 0.125±0.00 0.861±0.00 0.108±0.00 2.276±1.10 N/A
ENST00000418843 N/A N/A N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A N/A
ENST00000492201 N/A N/A N/A N/A N/A N/A N/A N/A 0.725±0.20 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045V CIL_00045V_0002 CGP 10:14897359-14988050

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000014 IDA single-stranded DNA endodeoxyribonuclease activity
GO:0000723 IEA telomere maintenance
GO:0000737 IDA DNA catabolic process, endonucleolytic
GO:0005634 IEA nucleus
GO:0006302 IEA double-strand break repair
GO:0006310 IEA DNA recombination
GO:0008409 IDA 5'-3' exonuclease activity
GO:0010212 IEA response to ionizing radiation
GO:0030183 IEA B cell differentiation
GO:0033151 IEA V(D)J recombination
GO:0051276 IEA chromosome organization
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045704 dclre1c DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000026648 Dclre1c DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) protein_coding Mus_musculus

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