C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DNA cross-link repair 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378258 DCLRE1C-007 ENSG00000152457 9606 - 10:14908171-14954072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungPlacentaENST00000378258
Transcript ID Bladder Heart Lung Placenta
ENST00000378258 0.711±0.00 0.383±0.02 0.830±0.00 0.910±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045V CIL_00045V_0002 CGP 10:14897359-14988050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000014 IDA single-stranded DNA endodeoxyribonuclease activity
GO:0000737 IDA DNA catabolic process, endonucleolytic
GO:0005634 IEA nucleus
GO:0008409 IDA 5'-3' exonuclease activity
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102988 Dclre1c-003 protein_coding Mus_musculus 0 1236
ENSMUST00000061852 Dclre1c-001 protein_coding Mus_musculus 0 1157
ENSMUST00000100463 Dclre1c-201 protein_coding Mus_musculus 0 966
ENSMUST00000131433 Dclre1c-004 retained_intron Mus_musculus 0 625
ENSMUST00000132565 Dclre1c-005 processed_transcript Mus_musculus 0 381
ENSMUST00000146027 Dclre1c-006 processed_transcript Mus_musculus 0 224

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