C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026648 Dclre1c 10090 + 2:3424131-3464130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061852 Dclre1c-001 3424131-3464130 protein_coding
  ENSMUST00000100463 Dclre1c-201 3424131-3461111 protein_coding
  ENSMUST00000102988 Dclre1c-003 3424150-3454092 protein_coding
  ENSMUST00000115066 Dclre1c-002 3424165-3461103 protein_coding
  ENSMUST00000129657 Dclre1c-008 3440829-3458921 protein_coding
  ENSMUST00000131433 Dclre1c-004 3424202-3442206 retained_intron
  ENSMUST00000132565 Dclre1c-005 3424150-3438014 processed_transcript
  ENSMUST00000146027 Dclre1c-006 3424165-3438052 processed_transcript
  ENSMUST00000152468 Dclre1c-007 3452949-3453867 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061852ENSMUST00000102988ENSMUST00000115066ENSMUST00000131433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061852 0.678±0.03 0.281±0.07 N/A 0.596±0.00 N/A 0.416±0.13 0.196±0.03 0.150±0.02 0.654±0.42 N/A 0.115±0.01 0.635±0.00 0.551±0.07 N/A
ENSMUST00000102988 2.129±0.21 0.819±0.14 2.002±1.01 2.929±0.79 2.396±0.60 1.406±0.52 0.658±0.05 0.718±0.04 1.172±1.25 1.590±0.08 0.341±0.14 1.554±0.42 2.308±0.77 2.747±0.90
ENSMUST00000115066 N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.01 N/A N/A N/A N/A N/A
ENSMUST00000131433 1.786±0.00 0.882±0.34 1.320±0.00 1.694±0.00 2.595±0.00 N/A N/A N/A 0.210±0.00 N/A N/A 1.614±0.34 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000014 IEA single-stranded DNA endodeoxyribonuclease activity
GO:0000723 IMP telomere maintenance
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0005634 IC nucleus
GO:0006302 IMP double-strand break repair
GO:0006310 IMP DNA recombination
GO:0008409 ISO 5'-3' exonuclease activity
GO:0010212 IMP response to ionizing radiation
GO:0030183 IMP B cell differentiation
GO:0033151 IMP V(D)J recombination
GO:0051276 IMP chromosome organization
GO:0090305 ISO nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045704 dclre1c DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000152457 DCLRE1C DNA cross-link repair 1C protein_coding Homo_sapiens

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