C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 36
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152503 TRIM36 9606 - 5:115124762-115180546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282369 TRIM36-001 115124762-115180159 protein_coding
  ENST00000379617 TRIM36-006 115177123-115180546 protein_coding
  ENST00000379618 TRIM36-003 115171102-115180546 protein_coding
  ENST00000508894 TRIM36-009 115147176-115169909 protein_coding
  ENST00000510222 TRIM36-008 115147069-115169866 processed_transcript
  ENST00000511701 TRIM36-007 115171106-115174281 processed_transcript
  ENST00000513154 TRIM36-004 115124763-115169961 protein_coding
  ENST00000513485 TRIM36-011 115141324-115153811 processed_transcript
  ENST00000514154 TRIM36-002 115126503-115180037 protein_coding
  ENST00000515104 TRIM36-010 115147068-115169730 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282369ENST00000379617ENST00000379618ENST00000510222ENST00000513154ENST00000513485ENST00000514154ENST00000515104
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282369 N/A 1.104±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.315±0.16 0.148±0.05 N/A
ENST00000379617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A
ENST00000379618 N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A 0.861±0.33 0.716±0.23 N/A
ENST00000510222 N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A
ENST00000513154 N/A 1.820±0.84 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 13.341±5.89
ENST00000513485 0.513±0.00 N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000514154 N/A 1.922±0.00 0.611±0.00 1.023±0.00 N/A 0.079±0.00 0.279±0.00 0.475±0.23 0.407±0.00 0.183±0.12 0.064±0.03 63.167±13.45
ENST00000515104 N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UO CIL_0004UO_0001 CGP 5:114360945-115180546
CIL_0004UL CIL_0004UL_0001 CGP 5:115124762-115262872

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005856 IEA cytoskeleton
GO:0007340 IEA acrosome reaction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051726 IEA regulation of cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062794 trim36 tripartite motif-containing 36 protein_coding Danio_rerio
ENSMUSG00000033949 Trim36 tripartite motif-containing 36 protein_coding Mus_musculus

Loading