C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152503-ENSG00000164219 CGP 9606 5:115124762-115262872
GeneTranscriptPositionBiotype
ENSG00000152503 (TRIM36)
tripartite motif containing 36 		ENST00000282369 (TRIM36-001) 115124762-115180159 protein_coding
ENST00000379617 (TRIM36-006) 115177123-115180546 protein_coding
ENST00000379618 (TRIM36-003) 115171102-115180546 protein_coding
ENST00000508894 (TRIM36-009) 115147176-115169909 protein_coding
ENST00000510222 (TRIM36-008) 115147069-115169866 processed_transcript
ENST00000511701 (TRIM36-007) 115171106-115174281 processed_transcript
ENST00000513154 (TRIM36-004) 115124763-115169961 protein_coding
ENST00000513485 (TRIM36-011) 115141324-115153811 processed_transcript
ENST00000514154 (TRIM36-002) 115126503-115180037 protein_coding
ENST00000515104 (TRIM36-010) 115147068-115169730 processed_transcript
ENSG00000248175 (CTC-428G20.3)
 ENST00000507241 (CTC-428G20.3-001) 115204012-115206246 lincRNA
ENSG00000249791 (CTC-428G20.2)
 ENST00000514544 (CTC-428G20.2-001) 115188563-115188932 antisense
ENSG00000250472 (TRIM36-IT1)
TRIM36 intronic transcript 1 (non-protein coding) 		ENST00000503723 (TRIM36-IT1-001) 115148764-115149644 sense_intronic
CIL_0004UL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033949-ENSMUSG00000024477 CGP 10090 18:46165302-46280850
GeneTranscriptPositionBiotype
ENSMUSG00000024477 (Pggt1b)
protein geranylgeranyltransferase type I, beta subunit 		ENSMUST00000025354 (Pggt1b-201) 46239949-46280850 protein_coding
ENSMUSG00000033949 (Trim36)
tripartite motif-containing 36 		ENSMUST00000037011 (Trim36-201) 46165302-46212607 protein_coding
ENSMUST00000167364 (Trim36-202) 46165302-46198818 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UL_0001ENSG00000152503ENST00000282369ENST00000379617ENST00000379618ENST00000508894ENST00000510222ENST00000511701ENST00000513154ENST00000513485ENST00000514154ENST00000515104ENSG00000248175ENST00000507241ENSG00000249791ENST00000514544ENSG00000250472ENST00000503723CIL_0004UL_0002ENSMUSG00000024477ENSMUST00000025354ENSMUSG00000033949ENSMUST00000037011ENSMUST00000167364
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UL_0001ENSG00000152503ENST00000282369ENST00000379617ENST00000379618ENST00000510222ENST00000513154ENST00000513485ENST00000514154ENST00000515104ENSG00000248175ENST00000507241ENSG00000249791ENST00000514544ENSG00000250472ENST00000503723CIL_0004UL_0002ENSMUSG00000024477ENSMUST00000025354ENSMUSG00000033949ENSMUST00000037011ENSMUST00000167364
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152503 ENST00000282369 N/A N/A N/A 1.104±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.315±0.16 0.148±0.05 N/A
ENST00000379617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A
ENST00000379618 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A 0.861±0.33 0.716±0.23 N/A
ENST00000508894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A
ENST00000511701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513154 N/A N/A N/A 1.820±0.84 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 13.341±5.89
ENST00000513485 N/A 0.513±0.00 N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000514154 N/A N/A N/A 1.922±0.00 0.611±0.00 1.023±0.00 N/A 0.079±0.00 0.279±0.00 0.475±0.23 0.407±0.00 0.183±0.12 0.064±0.03 63.167±13.45
ENST00000515104 N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A
ENSG00000248175 ENST00000507241 0.713±0.00 2.911±0.00 1.072±0.00 1.421±0.33 1.562±0.67 1.835±0.98 0.919±0.20 1.904±0.63 1.071±0.24 0.480±0.05 0.648±0.50 1.531±0.38 0.564±0.12 1.469±0.00
ENSG00000249791 ENST00000514544 N/A N/A N/A 0.118±0.00 N/A 0.041±0.00 N/A N/A 0.158±0.00 N/A 0.153±0.00 0.376±0.00 N/A 0.397±0.00
ENSG00000250472 ENST00000503723 N/A N/A N/A 0.017±0.00 N/A 1.382±0.00 N/A N/A N/A N/A N/A N/A N/A 0.079±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024477 ENSMUST00000025354 1.877±0.53 3.359±0.83 N/A 2.396±0.97 3.114±1.43 4.843±1.25 0.893±0.17 2.116±0.57 1.312±0.38 5.617±2.33 N/A 3.530±1.01 2.987±0.89 1.400±0.53
ENSMUSG00000033949 ENSMUST00000037011 N/A N/A 0.548±0.00 3.843±0.54 N/A N/A N/A N/A 0.062±0.04 N/A N/A 0.096±0.03 N/A N/A
ENSMUST00000167364 0.677±0.40 0.735±0.39 0.675±0.16 0.098±0.00 0.887±0.48 5.078±1.08 0.270±0.16 0.511±0.16 0.140±0.06 1.141±0.19 0.072±0.02 0.551±0.36 1.142±0.81 51.599±29.82

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