C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080709-ENSG00000152503 CGP 9606 5:114360945-115180546
GeneTranscriptPositionBiotype
ENSG00000080709 (KCNN2)
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 		ENST00000264773 (KCNN2-201) 114362319-114496497 protein_coding
ENST00000503706 (KCNN2-002) 114433530-114496516 protein_coding
ENST00000505491 (KCNN2-004) 114433578-114493442 nonsense_mediated_decay
ENST00000506812 (KCNN2-003) 114486671-114496058 retained_intron
ENST00000507750 (KCNN2-005) 114363107-114495946 processed_transcript
ENST00000512097 (KCNN2-001) 114360945-114496640 protein_coding
ENST00000610748 (KCNN2-202) 114362319-114496495 protein_coding
ENSG00000152503 (TRIM36)
tripartite motif containing 36 		ENST00000282369 (TRIM36-001) 115124762-115180159 protein_coding
ENST00000379617 (TRIM36-006) 115177123-115180546 protein_coding
ENST00000379618 (TRIM36-003) 115171102-115180546 protein_coding
ENST00000508894 (TRIM36-009) 115147176-115169909 protein_coding
ENST00000510222 (TRIM36-008) 115147069-115169866 processed_transcript
ENST00000511701 (TRIM36-007) 115171106-115174281 processed_transcript
ENST00000513154 (TRIM36-004) 115124763-115169961 protein_coding
ENST00000513485 (TRIM36-011) 115141324-115153811 processed_transcript
ENST00000514154 (TRIM36-002) 115126503-115180037 protein_coding
ENST00000515104 (TRIM36-010) 115147068-115169730 processed_transcript
ENSG00000250472 (TRIM36-IT1)
TRIM36 intronic transcript 1 (non-protein coding) 		ENST00000503723 (TRIM36-IT1-001) 115148764-115149644 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0004UO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054477-ENSMUSG00000033949 CGP 10090 18:45268860-46212607
GeneTranscriptPositionBiotype
ENSMUSG00000033949 (Trim36)
tripartite motif-containing 36 		ENSMUST00000037011 (Trim36-201) 46165302-46212607 protein_coding
ENSMUST00000167364 (Trim36-202) 46165302-46198818 protein_coding
ENSMUSG00000054477 (Kcnn2)
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 		ENSMUST00000066890 (Kcnn2-201) 45269005-45686024 protein_coding
ENSMUST00000167895 (Kcnn2-002) 45560154-45675362 processed_transcript
ENSMUST00000169783 (Kcnn2-202) 45560154-45685882 protein_coding
ENSMUST00000183623 (Kcnn2-005) 45268860-45289824 processed_transcript
ENSMUST00000183850 (Kcnn2-001) 45269005-45685883 protein_coding
ENSMUST00000183897 (Kcnn2-004) 45559811-45593065 retained_intron
ENSMUST00000184101 (Kcnn2-003) 45559469-45671249 retained_intron
ENSMUSG00000073569 (Gm10540)
predicted gene 10540 		ENSMUST00000097581 (Gm10540-201) 45285833-45286108 processed_pseudogene
ENSMUSG00000098284 (A330093E20Rik)
RIKEN cDNA A330093E20 gene 		ENSMUST00000184346 (A330093E20Rik-002) 45685130-45854544 antisense
ENSMUST00000184994 (A330093E20Rik-001) 45683487-45896509 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UO_0001ENSG00000080709ENST00000264773ENST00000503706ENST00000505491ENST00000506812ENST00000507750ENST00000512097ENST00000610748ENSG00000152503ENST00000282369ENST00000379617ENST00000379618ENST00000508894ENST00000510222ENST00000511701ENST00000513154ENST00000513485ENST00000514154ENST00000515104ENSG00000250472ENST00000503723CIL_0004UO_0002ENSMUSG00000033949ENSMUST00000037011ENSMUST00000167364ENSMUSG00000054477ENSMUST00000066890ENSMUST00000167895ENSMUST00000169783ENSMUST00000183623ENSMUST00000183850ENSMUST00000183897ENSMUST00000184101ENSMUSG00000073569ENSMUST00000097581ENSMUSG00000098284ENSMUST00000184346ENSMUST00000184994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UO_0001ENSG00000080709ENST00000264773ENST00000503706ENST00000505491ENST00000507750ENST00000512097ENST00000610748ENSG00000152503ENST00000282369ENST00000379617ENST00000379618ENST00000510222ENST00000513154ENST00000513485ENST00000514154ENST00000515104ENSG00000250472ENST00000503723CIL_0004UO_0002ENSMUSG00000033949ENSMUST00000037011ENSMUST00000167364ENSMUSG00000054477ENSMUST00000066890ENSMUST00000167895ENSMUST00000169783ENSMUST00000183623ENSMUST00000183850ENSMUST00000183897ENSMUST00000184101ENSMUSG00000073569ENSMUST00000097581ENSMUSG00000098284ENSMUST00000184346ENSMUST00000184994
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080709 ENST00000264773 N/A 0.313±0.00 0.172±0.00 2.129±0.73 0.162±0.04 0.805±0.41 1.498±1.03 3.378±3.09 2.764±0.89 0.306±0.00 0.162±0.04 0.098±0.06 N/A 0.641±0.32
ENST00000503706 N/A 0.471±0.00 N/A 1.259±0.00 0.140±0.06 N/A N/A 0.195±0.00 N/A N/A N/A 0.184±0.16 0.135±0.00 0.950±0.07
ENST00000505491 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 0.074±0.00 N/A
ENST00000512097 0.102±0.00 N/A N/A N/A N/A N/A 1.386±0.00 0.068±0.00 N/A N/A N/A 0.169±0.00 0.064±0.00 0.205±0.00
ENST00000610748 N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.644±0.00 0.169±0.00 N/A 0.069±0.00 N/A N/A
ENSG00000152503 ENST00000282369 N/A N/A N/A 1.104±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.315±0.16 0.148±0.05 N/A
ENST00000379617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A
ENST00000379618 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A 0.861±0.33 0.716±0.23 N/A
ENST00000508894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A
ENST00000511701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513154 N/A N/A N/A 1.820±0.84 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 13.341±5.89
ENST00000513485 N/A 0.513±0.00 N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000514154 N/A N/A N/A 1.922±0.00 0.611±0.00 1.023±0.00 N/A 0.079±0.00 0.279±0.00 0.475±0.23 0.407±0.00 0.183±0.12 0.064±0.03 63.167±13.45
ENST00000515104 N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A
ENSG00000250472 ENST00000503723 N/A N/A N/A 0.017±0.00 N/A 1.382±0.00 N/A N/A N/A N/A N/A N/A N/A 0.079±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033949 ENSMUST00000037011 N/A N/A 0.548±0.00 3.843±0.54 N/A N/A N/A N/A 0.062±0.04 N/A N/A 0.096±0.03 N/A N/A
ENSMUST00000167364 0.677±0.40 0.735±0.39 0.675±0.16 0.098±0.00 0.887±0.48 5.078±1.08 0.270±0.16 0.511±0.16 0.140±0.06 1.141±0.19 0.072±0.02 0.551±0.36 1.142±0.81 51.599±29.82
ENSMUSG00000054477 ENSMUST00000066890 N/A N/A N/A N/A 0.044±0.00 N/A N/A 0.177±0.00 0.041±0.00 N/A 0.191±0.03 N/A N/A 0.034±0.00
ENSMUST00000167895 0.083±0.00 N/A N/A N/A 0.071±0.00 N/A 1.992±0.41 0.431±0.17 2.152±1.94 N/A 0.440±0.07 0.437±0.00 0.076±0.05 0.175±0.05
ENSMUST00000169783 N/A N/A N/A 15.999±0.00 0.105±0.00 N/A N/A N/A 0.020±0.00 N/A 0.302±0.10 0.717±0.07 0.099±0.03 0.136±0.00
ENSMUST00000183623 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.021±0.01 0.018±0.00
ENSMUST00000183850 0.157±0.10 N/A 2.214±0.57 1.830±0.53 N/A N/A 0.869±0.21 0.182±0.05 0.379±0.44 N/A 0.387±0.14 0.251±0.03 0.042±0.03 0.020±0.00
ENSMUST00000183897 N/A N/A N/A N/A 0.057±0.03 N/A N/A N/A 3.745±0.63 N/A N/A N/A N/A N/A
ENSMUST00000184101 0.053±0.00 68.778±4.66 N/A N/A 0.094±0.00 N/A N/A 0.292±0.11 1.652±1.12 0.195±0.07 N/A 1.057±0.45 0.060±0.00 0.097±0.00
ENSMUSG00000073569 ENSMUST00000097581 N/A N/A 0.316±0.17 0.426±0.22 N/A N/A 0.571±0.16 N/A 0.079±0.02 N/A N/A 1.344±0.65 2.648±1.43 0.224±0.00
ENSMUSG00000098284 ENSMUST00000184346 N/A N/A N/A 17.990±0.00 N/A N/A N/A 0.663±0.13 0.036±0.00 N/A 0.992±0.05 0.768±0.00 0.239±0.13 0.205±0.04
ENSMUST00000184994 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A 0.121±0.00

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