C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 78
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152763 WDR78 9606 - 1:66812885-66924887 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371022 WDR78-006 66870805-66924846 protein_coding
  ENST00000371023 WDR78-003 66837603-66924840 protein_coding
  ENST00000371026 WDR78-001 66812885-66924887 protein_coding
  ENST00000464352 WDR78-007 66813970-66874878 protein_coding
  ENST00000469450 WDR78-009 66847924-66871509 protein_coding
  ENST00000474506 WDR78-005 66921243-66924696 processed_transcript
  ENST00000488333 WDR78-004 66904859-66907016 protein_coding
  ENST00000491297 WDR78-002 66812891-66905303 nonsense_mediated_decay
  ENST00000493572 WDR78-008 66860713-66862304 processed_transcript
  ENST00000531552 WDR78-011 66837607-66862303 protein_coding
  ENST00000531980 WDR78-010 66862273-66924819 nonsense_mediated_decay
  ENST00000532629 WDR78-012 66893277-66924819 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371022ENST00000371023ENST00000371026ENST00000464352ENST00000488333ENST00000491297ENST00000531980ENST00000532629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371022 N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A 1.243±0.00 N/A N/A N/A N/A
ENST00000371023 N/A N/A N/A 2.162±0.00 1.767±0.00 N/A 0.131±0.00 N/A 1.535±0.00 N/A N/A N/A 0.154±0.00 10.910±0.00
ENST00000371026 N/A N/A 0.273±0.00 N/A 0.055±0.00 0.080±0.00 0.160±0.00 0.475±0.00 N/A 0.884±0.39 N/A 0.754±0.62 0.208±0.07 6.797±4.04
ENST00000464352 N/A N/A N/A N/A N/A 1.243±0.00 N/A N/A 0.534±0.00 N/A 0.032±0.00 0.590±0.42 0.218±0.00 9.183±0.30
ENST00000488333 N/A N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491297 0.091±0.00 0.150±0.00 N/A N/A N/A 0.309±0.00 N/A 0.317±0.27 0.062±0.00 0.455±0.00 0.006±0.00 0.336±0.00 N/A N/A
ENST00000531980 N/A N/A N/A 7.431±0.00 N/A N/A 2.944±0.00 N/A 2.534±0.00 6.568±0.00 N/A N/A N/A N/A
ENST00000532629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.824±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000260 CIL_000260_0001 CGP 1:66797741-66924887
CIL_000261 CIL_000261_0001 CGP 1:66812885-66988619

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044400 wdr78 WD repeat domain 78 protein_coding Danio_rerio
ENSMUSG00000035126 Wdr78 WD repeat domain 78 protein_coding Mus_musculus

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