C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000261_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152763-ENSG00000198160 CGP 9606 1:66812885-66988619
GeneTranscriptPositionBiotype
ENSG00000152763 (WDR78)
WD repeat domain 78 		ENST00000371022 (WDR78-006) 66870805-66924846 protein_coding
ENST00000371023 (WDR78-003) 66837603-66924840 protein_coding
ENST00000371026 (WDR78-001) 66812885-66924887 protein_coding
ENST00000464352 (WDR78-007) 66813970-66874878 protein_coding
ENST00000469450 (WDR78-009) 66847924-66871509 protein_coding
ENST00000474506 (WDR78-005) 66921243-66924696 processed_transcript
ENST00000488333 (WDR78-004) 66904859-66907016 protein_coding
ENST00000491297 (WDR78-002) 66812891-66905303 nonsense_mediated_decay
ENST00000493572 (WDR78-008) 66860713-66862304 processed_transcript
ENST00000531552 (WDR78-011) 66837607-66862303 protein_coding
ENST00000531980 (WDR78-010) 66862273-66924819 nonsense_mediated_decay
ENST00000532629 (WDR78-012) 66893277-66924819 nonsense_mediated_decay
ENSG00000198160 (MIER1)
mesoderm induction early response 1, transcriptional regulator 		ENST00000355356 (MIER1-002) 66930243-66988030 protein_coding
ENST00000355977 (MIER1-201) 66924895-66988619 protein_coding
ENST00000357692 (MIER1-001) 66924957-66988031 protein_coding
ENST00000371012 (MIER1-003) 66924967-66948240 protein_coding
ENST00000371014 (MIER1-008) 66924959-66986670 protein_coding
ENST00000371016 (MIER1-006) 66924959-66986670 protein_coding
ENST00000371018 (MIER1-202) 66924895-66988619 protein_coding
ENST00000401041 (MIER1-009) 66924959-66985684 protein_coding
ENST00000401042 (MIER1-007) 66930243-66986670 protein_coding
ENST00000479067 (MIER1-004) 66932652-66959750 processed_transcript
ENST00000493357 (MIER1-005) 66958911-66960078 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_000261_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035126-ENSMUSG00000028522 CGP 10090 4:103038065-103165754
GeneTranscriptPositionBiotype
ENSMUSG00000028522 (Mier1)
mesoderm induction early response 1 homolog (Xenopus laevis 		ENSMUST00000030247 (Mier1-201) 103115560-103165749 protein_coding
ENSMUST00000097945 (Mier1-013) 103115638-103165749 protein_coding
ENSMUST00000106855 (Mier1-003) 103143057-103162754 protein_coding
ENSMUST00000106857 (Mier1-009) 103119286-103165752 protein_coding
ENSMUST00000106858 (Mier1-001) 103114395-103165754 protein_coding
ENSMUST00000124348 (Mier1-012) 103119410-103144423 retained_intron
ENSMUST00000128536 (Mier1-004) 103158586-103162823 processed_transcript
ENSMUST00000134533 (Mier1-007) 103115272-103127297 protein_coding
ENSMUST00000136092 (Mier1-014) 103114390-103115904 processed_transcript
ENSMUST00000137348 (Mier1-008) 103114431-103131021 processed_transcript
ENSMUST00000143417 (Mier1-006) 103114762-103118302 protein_coding
ENSMUST00000144219 (Mier1-005) 103114956-103118666 processed_transcript
ENSMUST00000147491 (Mier1-011) 103117295-103118590 processed_transcript
ENSMUST00000149259 (Mier1-002) 103114465-103143193 processed_transcript
ENSMUST00000151588 (Mier1-010) 103119390-103142573 retained_intron
ENSMUSG00000035126 (Wdr78)
WD repeat domain 78 		ENSMUST00000036451 (Wdr78-201) 103038065-103114299 protein_coding
ENSMUST00000036557 (Wdr78-202) 103038065-103114299 protein_coding
ENSMUST00000106868 (Wdr78-005) 103038069-103114555 protein_coding
ENSMUST00000116316 (Wdr78-001) 103038069-103114224 nonsense_mediated_decay
ENSMUST00000136355 (Wdr78-002) 103038101-103075619 retained_intron
ENSMUST00000138960 (Wdr78-003) 103038065-103073002 retained_intron
ENSMUST00000148673 (Wdr78-006) 103081937-103087356 protein_coding
ENSMUST00000152647 (Wdr78-004) 103039272-103041617 processed_transcript
ENSMUSG00000080744 (Gm12710)
predicted gene 12710 		ENSMUST00000119011 (Gm12710-001) 103103527-103103742 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000261_0001ENSG00000152763ENST00000371022ENST00000371023ENST00000371026ENST00000464352ENST00000469450ENST00000474506ENST00000488333ENST00000491297ENST00000493572ENST00000531552ENST00000531980ENST00000532629ENSG00000198160ENST00000355356ENST00000355977ENST00000357692ENST00000371012ENST00000371014ENST00000371016ENST00000371018ENST00000401041ENST00000401042ENST00000479067ENST00000493357CIL_000261_0002ENSMUSG00000028522ENSMUST00000030247ENSMUST00000097945ENSMUST00000106855ENSMUST00000106857ENSMUST00000106858ENSMUST00000124348ENSMUST00000128536ENSMUST00000134533ENSMUST00000136092ENSMUST00000137348ENSMUST00000143417ENSMUST00000144219ENSMUST00000147491ENSMUST00000149259ENSMUST00000151588ENSMUSG00000035126ENSMUST00000036451ENSMUST00000036557ENSMUST00000106868ENSMUST00000116316ENSMUST00000136355ENSMUST00000138960ENSMUST00000148673ENSMUST00000152647ENSMUSG00000080744ENSMUST00000119011
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000261_0001ENSG00000152763ENST00000371022ENST00000371023ENST00000371026ENST00000464352ENST00000488333ENST00000491297ENST00000531980ENST00000532629ENSG00000198160ENST00000355356ENST00000355977ENST00000357692ENST00000371014ENST00000371018ENST00000401041ENST00000401042ENST00000479067CIL_000261_0002ENSMUSG00000028522ENSMUST00000030247ENSMUST00000106855ENSMUST00000106857ENSMUST00000106858ENSMUST00000128536ENSMUST00000149259ENSMUSG00000035126ENSMUST00000036451ENSMUST00000036557ENSMUST00000106868ENSMUSG00000080744ENSMUST00000119011
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152763 ENST00000371022 N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A 1.243±0.00 N/A N/A N/A N/A
ENST00000371023 N/A N/A N/A 2.162±0.00 1.767±0.00 N/A 0.131±0.00 N/A 1.535±0.00 N/A N/A N/A 0.154±0.00 10.910±0.00
ENST00000371026 N/A N/A 0.273±0.00 N/A 0.055±0.00 0.080±0.00 0.160±0.00 0.475±0.00 N/A 0.884±0.39 N/A 0.754±0.62 0.208±0.07 6.797±4.04
ENST00000464352 N/A N/A N/A N/A N/A 1.243±0.00 N/A N/A 0.534±0.00 N/A 0.032±0.00 0.590±0.42 0.218±0.00 9.183±0.30
ENST00000469450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488333 N/A N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491297 0.091±0.00 0.150±0.00 N/A N/A N/A 0.309±0.00 N/A 0.317±0.27 0.062±0.00 0.455±0.00 0.006±0.00 0.336±0.00 N/A N/A
ENST00000493572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531980 N/A N/A N/A 7.431±0.00 N/A N/A 2.944±0.00 N/A 2.534±0.00 6.568±0.00 N/A N/A N/A N/A
ENST00000532629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.824±0.00 N/A N/A N/A
ENSG00000198160 ENST00000355356 8.676±0.00 7.559±0.00 0.997±0.00 3.778±2.08 3.844±2.78 9.674±1.15 1.455±1.11 7.457±0.00 3.673±1.53 7.193±2.69 2.070±1.98 4.477±2.39 3.828±1.54 9.985±0.00
ENST00000355977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A
ENST00000357692 N/A N/A N/A 1.313±0.00 N/A N/A N/A 2.855±0.00 N/A 1.776±0.00 N/A 0.590±0.00 0.405±0.00 3.656±0.95
ENST00000371012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.215±0.00 N/A 6.166±0.00
ENST00000371016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371018 N/A N/A 1.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A N/A
ENST00000401041 N/A N/A 1.790±0.00 2.179±0.00 2.817±0.00 4.794±0.00 0.530±0.00 N/A 3.004±0.00 4.083±0.00 N/A 3.442±0.00 N/A N/A
ENST00000401042 N/A N/A N/A N/A 2.782±0.00 N/A 1.140±0.00 1.713±0.00 3.464±0.00 N/A N/A 2.913±0.60 9.491±0.00 16.775±0.00
ENST00000479067 N/A N/A 5.353±0.00 5.877±0.00 5.638±0.00 N/A 2.076±0.00 N/A 8.946±0.00 N/A N/A N/A N/A N/A
ENST00000493357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028522 ENSMUST00000030247 N/A N/A N/A 5.232±0.75 N/A N/A 0.695±0.00 1.309±0.00 1.701±0.82 3.121±0.00 0.865±0.36 4.389±1.26 N/A N/A
ENSMUST00000097945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106855 N/A N/A N/A 24.672±0.00 N/A N/A N/A N/A N/A N/A N/A 53.587±31.56 64.284±5.29 83.589±0.00
ENSMUST00000106857 4.578±2.01 6.616±0.86 7.843±3.05 3.301±0.19 4.820±0.94 10.733±2.84 1.642±0.77 4.994±1.14 6.598±5.12 10.653±3.43 1.520±0.49 10.189±3.53 6.365±3.26 N/A
ENSMUST00000106858 N/A N/A N/A 1.137±0.00 N/A 2.381±0.00 N/A N/A 0.750±0.09 N/A N/A N/A N/A N/A
ENSMUST00000124348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.416±0.00 N/A N/A
ENSMUST00000134533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.576±0.00 24.898±0.00 N/A
ENSMUST00000151588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035126 ENSMUST00000036451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.261±0.00 N/A 6.283±0.98
ENSMUST00000036557 N/A N/A N/A 2.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.114±8.95
ENSMUST00000106868 N/A 1.020±0.00 N/A 2.630±0.62 0.786±0.05 N/A N/A N/A N/A N/A N/A 2.708±1.05 N/A 9.711±1.59
ENSMUST00000116316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080744 ENSMUST00000119011 N/A N/A N/A 0.604±0.00 N/A N/A N/A 1.003±0.00 0.401±0.07 N/A N/A N/A 0.142±0.00 1.158±0.00

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