C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 78
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035126 Wdr78 10090 - 4:103038065-103114555 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036451 Wdr78-201 103038065-103114299 protein_coding
  ENSMUST00000036557 Wdr78-202 103038065-103114299 protein_coding
  ENSMUST00000106868 Wdr78-005 103038069-103114555 protein_coding
  ENSMUST00000116316 Wdr78-001 103038069-103114224 nonsense_mediated_decay
  ENSMUST00000136355 Wdr78-002 103038101-103075619 retained_intron
  ENSMUST00000138960 Wdr78-003 103038065-103073002 retained_intron
  ENSMUST00000148673 Wdr78-006 103081937-103087356 protein_coding
  ENSMUST00000152647 Wdr78-004 103039272-103041617 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryTestisENSMUST00000036451ENSMUST00000036557ENSMUST00000106868
Transcript ID Adrenal Brain Breast Ovary Testis
ENSMUST00000036451 N/A N/A N/A 3.261±0.00 6.283±0.98
ENSMUST00000036557 N/A 2.140±0.00 N/A N/A 10.114±8.95
ENSMUST00000106868 1.020±0.00 2.630±0.62 0.786±0.05 2.708±1.05 9.711±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000260 CIL_000260_0002 CGP 4:103017872-103114555
CIL_000261 CIL_000261_0002 CGP 4:103038065-103165754

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044400 wdr78 WD repeat domain 78 protein_coding Danio_rerio
ENSG00000152763 WDR78 WD repeat domain 78 protein_coding Homo_sapiens

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