C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152944 MED21 9606 + 12:27022546-27066343 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282892 MED21-001 27022550-27029749 protein_coding
  ENST00000536503 MED21-002 27022550-27029485 processed_transcript
  ENST00000536711 MED21-006 27022562-27028336 nonsense_mediated_decay
  ENST00000538186 MED21-003 27022577-27066240 processed_transcript
  ENST00000544998 MED21-004 27046152-27066343 processed_transcript
  ENST00000546323 MED21-005 27022546-27030756 protein_coding
  ENST00000621885 MED21-007 27030260-27030673 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282892ENST00000536503ENST00000546323
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282892 2.138±0.00 1.032±0.00 1.892±0.49 3.268±1.12 4.250±1.47 4.041±3.36 8.280±0.00 1.549±0.08 7.292±0.40 3.244±2.37 7.827±3.02 4.175±1.24 5.506±1.05
ENST00000536503 1.769±0.00 0.745±0.00 3.705±0.00 1.132±0.00 2.391±0.00 N/A N/A 0.595±0.00 N/A 2.997±0.00 N/A N/A 6.718±0.00
ENST00000546323 N/A N/A 5.448±0.00 8.173±0.00 5.224±0.00 2.638±0.00 3.997±0.00 7.531±0.00 7.877±0.00 1.868±0.00 4.283±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NM CIL_0003NM_0002 CGP 12:26973195-27066343

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001824 IEA blastocyst development
GO:0003713 IDA transcription coactivator activity
GO:0003899 TAS DNA-directed RNA polymerase activity
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0016592 IDA mediator complex
GO:0019827 IEA stem cell maintenance
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026839 med21 mediator complex subunit 21 protein_coding Danio_rerio
ENSMUSG00000030291 Med21 mediator complex subunit 21 protein_coding Mus_musculus

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