C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000093658-ENSDARG00000026839 CGP 7955 4:1591880-1618610
GeneTranscriptPositionBiotype
ENSDARG00000026839 (med21)
mediator complex subunit 21 		ENSDART00000032460 (med21-001) 1616517-1618610 protein_coding
ENSDARG00000093658 (tm7sf3)
transmembrane 7 superfamily member 3 		ENSDART00000136633 (tm7sf3-201) 1593845-1609986 protein_coding
ENSDART00000144074 (tm7sf3-001) 1591880-1616515 protein_coding
CIL_0003NM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064115-ENSG00000152944 CGP 9606 12:26973195-27066343
GeneTranscriptPositionBiotype
ENSG00000064115 (TM7SF3)
transmembrane 7 superfamily member 3 		ENST00000343028 (TM7SF3-001) 26973195-27014394 protein_coding
ENST00000512808 (TM7SF3-023) 26996851-27013014 protein_coding
ENST00000535260 (TM7SF3-022) 26975577-26995297 nonsense_mediated_decay
ENST00000535423 (TM7SF3-007) 26996783-27014369 protein_coding
ENST00000535819 (TM7SF3-019) 26980566-27014347 protein_coding
ENST00000537406 (TM7SF3-013) 26975556-26980608 protein_coding
ENST00000539399 (TM7SF3-005) 26999704-27014384 processed_transcript
ENST00000539741 (TM7SF3-016) 26995301-27014374 protein_coding
ENST00000541081 (TM7SF3-010) 26976330-26980271 retained_intron
ENST00000542019 (TM7SF3-021) 26995240-27014373 nonsense_mediated_decay
ENST00000542667 (TM7SF3-015) 26979902-27014211 processed_transcript
ENST00000543088 (TM7SF3-003) 26995361-27014434 protein_coding
ENST00000543655 (TM7SF3-017) 26980566-27003285 protein_coding
ENST00000543803 (TM7SF3-020) 26995235-27014359 protein_coding
ENST00000543882 (TM7SF3-009) 26976262-26996785 nonsense_mediated_decay
ENST00000544179 (TM7SF3-011) 26974096-26975775 retained_intron
ENST00000545303 (TM7SF3-012) 26975496-26995268 protein_coding
ENST00000545344 (TM7SF3-008) 26974154-26990546 protein_coding
ENST00000545600 (TM7SF3-004) 26999589-27014398 protein_coding
ENSG00000152944 (MED21)
mediator complex subunit 21 		ENST00000282892 (MED21-001) 27022550-27029749 protein_coding
ENST00000536503 (MED21-002) 27022550-27029485 processed_transcript
ENST00000536711 (MED21-006) 27022562-27028336 nonsense_mediated_decay
ENST00000538186 (MED21-003) 27022577-27066240 processed_transcript
ENST00000544998 (MED21-004) 27046152-27066343 processed_transcript
ENST00000546323 (MED21-005) 27022546-27030756 protein_coding
ENST00000621885 (MED21-007) 27030260-27030673 retained_intron
ENSG00000247903 (RP11-421F16.3)
 ENST00000500632 (RP11-421F16.3-001) 26971586-26979582 antisense
ENSG00000275764 (RP11-582E3.6)
 ENST00000620519 (RP11-582E3.6-001) 27037100-27038960 lincRNA
CIL_0003NM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040234-ENSMUSG00000030291 CGP 10090 6:146602352-146650602
GeneTranscriptPositionBiotype
ENSMUSG00000030291 (Med21)
mediator complex subunit 21 		ENSMUST00000032429 (Med21-001) 146642547-146650602 protein_coding
ENSMUST00000075077 (Med21-004) 146647160-146650602 retained_intron
ENSMUST00000111650 (Med21-005) 146642580-146649533 protein_coding
ENSMUST00000125539 (Med21-002) 146642547-146650602 processed_transcript
ENSMUST00000134387 (Med21-003) 146642581-146650602 processed_transcript
ENSMUSG00000040234 (Tm7sf3)
transmembrane 7 superfamily member 3 		ENSMUST00000037709 (Tm7sf3-001) 146602352-146634597 protein_coding
ENSMUST00000127529 (Tm7sf3-004) 146610891-146634498 nonsense_mediated_decay
ENSMUST00000138476 (Tm7sf3-003) 146619942-146642814 processed_transcript
ENSMUST00000147027 (Tm7sf3-002) 146621947-146642824 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NM_0001ENSDARG00000026839ENSDART00000032460ENSDARG00000093658ENSDART00000136633ENSDART00000144074CIL_0003NM_0002ENSG00000064115ENST00000343028ENST00000512808ENST00000535260ENST00000535423ENST00000535819ENST00000537406ENST00000539399ENST00000539741ENST00000541081ENST00000542019ENST00000542667ENST00000543088ENST00000543655ENST00000543803ENST00000543882ENST00000544179ENST00000545303ENST00000545344ENST00000545600ENSG00000152944ENST00000282892ENST00000536503ENST00000536711ENST00000538186ENST00000544998ENST00000546323ENST00000621885ENSG00000247903ENST00000500632ENSG00000275764ENST00000620519CIL_0003NM_0003ENSMUSG00000030291ENSMUST00000032429ENSMUST00000075077ENSMUST00000111650ENSMUST00000125539ENSMUST00000134387ENSMUSG00000040234ENSMUST00000037709ENSMUST00000127529ENSMUST00000138476ENSMUST00000147027
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NM_0001ENSDARG00000026839ENSDART00000032460ENSDARG00000093658ENSDART00000136633ENSDART00000144074CIL_0003NM_0002ENSG00000064115ENST00000343028ENST00000543655ENST00000544179ENST00000545344ENSG00000152944ENST00000282892ENST00000536503ENST00000546323ENSG00000247903ENST00000500632ENSG00000275764ENST00000620519CIL_0003NM_0003ENSMUSG00000030291ENSMUST00000032429ENSMUSG00000040234ENSMUST00000037709
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026839 ENSDART00000032460 N/A N/A N/A 5.686±1.10 N/A N/A 6.445±2.88 7.715±6.50 1.239±0.00 N/A 5.074±0.00 N/A N/A N/A
ENSDARG00000093658 ENSDART00000136633 N/A N/A N/A 1.895±0.87 N/A N/A 5.304±1.23 8.370±0.00 0.989±0.00 N/A N/A N/A N/A N/A
ENSDART00000144074 N/A N/A N/A 3.580±0.83 N/A N/A 3.509±0.55 7.954±1.46 1.106±0.00 N/A 2.913±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064115 ENST00000343028 3.595±0.00 5.041±0.00 2.845±0.00 4.415±1.03 5.455±3.45 4.760±2.73 2.324±1.07 9.271±0.00 3.750±2.33 6.213±0.02 0.829±0.48 14.475±6.63 9.972±4.08 7.173±0.09
ENST00000512808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543655 N/A N/A N/A N/A 9.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.479±0.00 N/A N/A N/A
ENST00000545303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A
ENST00000545600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152944 ENST00000282892 2.138±0.00 1.032±0.00 N/A 1.892±0.49 3.268±1.12 4.250±1.47 4.041±3.36 8.280±0.00 1.549±0.08 7.292±0.40 3.244±2.37 7.827±3.02 4.175±1.24 5.506±1.05
ENST00000536503 1.769±0.00 0.745±0.00 N/A 3.705±0.00 1.132±0.00 2.391±0.00 N/A N/A 0.595±0.00 N/A 2.997±0.00 N/A N/A 6.718±0.00
ENST00000536711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546323 N/A N/A N/A 5.448±0.00 8.173±0.00 5.224±0.00 2.638±0.00 3.997±0.00 7.531±0.00 7.877±0.00 1.868±0.00 4.283±0.00 N/A N/A
ENST00000621885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247903 ENST00000500632 1.190±0.00 2.846±0.00 1.962±0.00 3.063±0.00 2.297±0.57 1.565±0.91 0.953±0.00 3.687±0.00 1.086±0.00 1.932±0.49 0.600±0.00 1.853±0.13 N/A 3.132±0.00
ENSG00000275764 ENST00000620519 1.384±0.00 2.559±0.00 1.418±0.00 1.804±1.21 1.960±0.49 0.886±0.25 0.979±0.41 2.012±1.32 1.476±0.32 1.436±0.11 1.049±0.81 2.274±0.65 0.930±0.42 2.260±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030291 ENSMUST00000032429 22.701±1.10 N/A 33.050±6.11 20.972±11.27 17.450±8.76 13.299±1.59 21.219±2.26 25.875±3.76 32.082±12.59 15.527±0.54 15.522±1.69 14.907±4.24 37.930±12.12 24.728±10.17
ENSMUST00000075077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040234 ENSMUST00000037709 11.009±4.06 17.498±1.77 11.830±1.28 5.022±1.78 6.884±0.79 15.469±2.74 3.911±1.17 20.041±0.75 14.125±5.21 11.000±2.69 2.312±0.45 11.721±2.95 4.240±0.49 3.145±0.93
ENSMUST00000127529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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