C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000282892 MED21-001 ENSG00000152944 9606 + 12:27022550-27029749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282892
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282892 2.138±0.00 1.032±0.00 1.892±0.49 3.268±1.12 4.250±1.47 4.041±3.36 8.280±0.00 1.549±0.08 7.292±0.40 3.244±2.37 7.827±3.02 4.175±1.24 5.506±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NM CIL_0003NM_0002 CGP 12:26973195-27066343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IEA blastocyst development
GO:0003713 IDA transcription coactivator activity
GO:0003899 TAS DNA-directed RNA polymerase activity
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0016592 IDA mediator complex
GO:0019827 IEA stem cell maintenance
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032429 Med21-001 protein_coding Mus_musculus 0 719
ENSMUST00000075077 Med21-004 retained_intron Mus_musculus 0 664
ENSMUST00000134387 Med21-003 processed_transcript Mus_musculus 0 540
ENSMUST00000125539 Med21-002 processed_transcript Mus_musculus 0 518
ENSMUST00000111650 Med21-005 protein_coding Mus_musculus 0 375

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