C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIE, polypeptide 1, alpha 56kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153767 GTF2E1 9606 + 3:120742637-120783069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283875 GTF2E1-001 120742732-120783069 protein_coding
  ENST00000469772 GTF2E1-006 120742732-120776660 protein_coding
  ENST00000484715 GTF2E1-002 120742637-120750700 protein_coding
  ENST00000492959 GTF2E1-003 120742744-120750918 protein_coding
  ENST00000497393 GTF2E1-005 120742762-120751056 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283875ENST00000497393
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283875 4.318±0.00 3.914±0.00 2.078±0.76 3.011±1.41 2.114±0.60 1.164±0.64 1.905±1.32 1.989±0.32 1.318±0.05 1.349±0.00 2.619±1.40 2.610±0.16 11.503±2.24
ENST00000497393 N/A N/A N/A N/A N/A N/A 3.777±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS:IEA transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0043565 IEA sequence-specific DNA binding
GO:0045111 IDA intermediate filament cytoskeleton
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000542 gtf2e1 general transcription factor IIE, polypeptide 1, alpha protein_coding Danio_rerio
ENSMUSG00000022828 Gtf2e1 general transcription factor II E, polypeptide 1 (alpha subunit) protein_coding Mus_musculus

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