C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIE, polypeptide 1, alpha 56kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283875 GTF2E1-001 ENSG00000153767 9606 + 3:120742732-120783069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283875
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283875 4.318±0.00 3.914±0.00 2.078±0.76 3.011±1.41 2.114±0.60 1.164±0.64 1.905±1.32 1.989±0.32 1.318±0.05 1.349±0.00 2.619±1.40 2.610±0.16 11.503±2.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS:IEA transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0043565 IEA sequence-specific DNA binding
GO:0045111 IDA intermediate filament cytoskeleton
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023525 Gtf2e1-001 protein_coding Mus_musculus 0 1659
ENSMUST00000121103 AU015228-001 processed_pseudogene Mus_musculus 0 1291
ENSMUST00000130350 Gtf2e1-002 retained_intron Mus_musculus 0 645

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