C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154719 MRPL39 9606 - 21:25585656-25607517 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307301 MRPL39-002 25585656-25607517 protein_coding
  ENST00000352957 MRPL39-001 25585656-25607517 protein_coding
  ENST00000419219 MRPL39-003 25592812-25607484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307301ENST00000352957ENST00000419219
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307301 N/A N/A N/A N/A 0.709±0.00 N/A N/A N/A N/A 0.509±0.00 N/A N/A N/A N/A
ENST00000352957 6.448±0.00 13.587±0.00 0.810±0.00 8.422±0.49 6.568±3.50 7.309±3.42 7.655±3.10 10.465±4.17 11.725±0.00 2.908±0.81 5.997±1.85 14.477±9.66 14.403±6.98 63.907±19.84
ENST00000419219 2.795±0.00 N/A 1.747±0.00 N/A 1.762±0.00 2.707±0.00 4.830±0.73 3.848±0.00 N/A N/A 1.951±0.00 N/A N/A 17.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0001 CGP 21:25585656-25717562

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005739 IEA mitochondrion
GO:0005761 NAS mitochondrial ribosome
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041570 mrpl39 mitochondrial ribosomal protein L39 protein_coding Danio_rerio
ENSMUSG00000022889 Mrpl39 mitochondrial ribosomal protein L39 protein_coding Mus_musculus

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