C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022889 Mrpl39 10090 - 16:84717576-84735742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000116584 Mrpl39-001 84717576-84735742 protein_coding
  ENSMUST00000133901 Mrpl39-002 84734168-84735230 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116584ENSMUST00000133901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116584 4.632±1.40 2.278±0.19 7.877±0.85 8.510±1.08 2.125±0.94 1.277±0.83 7.051±0.84 8.019±2.16 9.433±4.64 3.535±1.56 6.040±1.71 3.697±5.73 10.034±3.14 17.965±10.51
ENSMUST00000133901 N/A 26.625±4.32 N/A N/A 3.019±0.00 7.872±3.55 N/A 10.263±2.49 30.050±2.76 3.598±1.12 N/A 5.282±1.44 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0002 CGP 16:84717576-84825928

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000002 TAS mitochondrial genome maintenance
GO:0000166 IEA nucleotide binding
GO:0003735 ISA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005762 ISA mitochondrial large ribosomal subunit
GO:0006412 ISA translation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041570 mrpl39 mitochondrial ribosomal protein L39 protein_coding Danio_rerio
ENSG00000154719 MRPL39 mitochondrial ribosomal protein L39 protein_coding Homo_sapiens

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