C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155256 ZFYVE27 9606 + 10:97737121-97760907 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337540 ZFYVE27-201 97737121-97760906 protein_coding
  ENST00000357540 ZFYVE27-202 97737121-97760906 protein_coding
  ENST00000359980 ZFYVE27-006 97737140-97760895 protein_coding
  ENST00000370610 ZFYVE27-203 97737121-97760906 protein_coding
  ENST00000370613 ZFYVE27-204 97737121-97760906 protein_coding
  ENST00000393677 ZFYVE27-003 97737123-97760907 protein_coding
  ENST00000423811 ZFYVE27-005 97738544-97760895 protein_coding
  ENST00000462887 ZFYVE27-007 97737183-97738845 processed_transcript
  ENST00000473237 ZFYVE27-002 97757642-97758171 processed_transcript
  ENST00000477521 ZFYVE27-001 97757203-97759787 processed_transcript
  ENST00000481956 ZFYVE27-008 97750033-97751421 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337540ENST00000357540ENST00000359980ENST00000370610ENST00000370613ENST00000393677ENST00000423811ENST00000462887ENST00000473237ENST00000481956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337540 N/A N/A N/A N/A 1.492±0.00 1.137±0.00 N/A N/A 2.007±0.00 N/A N/A 1.778±0.00 1.986±0.17 N/A
ENST00000357540 0.650±0.00 1.917±0.00 N/A N/A N/A 0.958±0.00 N/A N/A 0.441±0.00 1.096±0.00 N/A 2.548±0.00 N/A 1.728±0.00
ENST00000359980 1.089±0.00 N/A 0.625±0.00 N/A 1.214±0.53 1.833±0.00 1.199±0.63 2.956±2.09 1.291±0.00 3.674±0.00 N/A 3.689±2.18 2.380±0.84 2.122±0.00
ENST00000370610 0.814±0.00 N/A N/A 5.467±0.00 0.641±0.00 N/A N/A 4.170±0.00 0.566±0.00 N/A 1.398±0.00 2.304±0.19 1.190±0.00 2.593±0.29
ENST00000370613 N/A N/A N/A 3.194±0.00 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.550±0.00
ENST00000393677 N/A N/A N/A 4.792±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423811 N/A N/A N/A 1.546±0.00 0.673±0.00 N/A N/A N/A N/A 0.371±0.00 N/A 0.328±0.00 N/A N/A
ENST00000462887 N/A N/A N/A N/A N/A N/A N/A 1.301±0.00 N/A N/A 0.183±0.00 N/A N/A N/A
ENST00000473237 N/A N/A N/A N/A N/A N/A N/A 1.433±0.00 N/A N/A N/A N/A N/A N/A
ENST00000481956 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.908±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VD CIL_0004VD_0001 CGP 10:97713173-97760907
CIL_0004V8 CIL_0004V8_0001 CGP 10:97737121-97771952

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0031175 IDA neuron projection development
GO:0032584 ISS growth cone membrane
GO:0046872 IEA metal ion binding
GO:0048011 ISS neurotrophin TRK receptor signaling pathway
GO:0055038 ISS recycling endosome membrane
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059835 zfyve27 zinc finger, FYVE domain containing 27 protein_coding Danio_rerio
ENSMUSG00000018820 Zfyve27 zinc finger, FYVE domain containing 27 protein_coding Mus_musculus

Loading