C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, FYVE domain containing 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337540 ZFYVE27-201 ENSG00000155256 9606 + 10:97737121-97760906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryPlacentaENST00000337540
Transcript ID Breast Colon Liver Ovary Placenta
ENST00000337540 1.492±0.00 1.137±0.00 2.007±0.00 1.778±0.00 1.986±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VD CIL_0004VD_0001 CGP 10:97713173-97760907
CIL_0004V8 CIL_0004V8_0001 CGP 10:97737121-97771952

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0031175 IDA neuron projection development
GO:0032584 ISS growth cone membrane
GO:0046872 IEA metal ion binding
GO:0048011 ISS neurotrophin TRK receptor signaling pathway
GO:0055038 ISS recycling endosome membrane
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099443 Zfyve27-003 protein_coding Mus_musculus 0 948
ENSMUST00000169536 Zfyve27-001 protein_coding Mus_musculus 0 852
ENSMUST00000170184 Zfyve27-008 retained_intron Mus_musculus 0 440
ENSMUST00000164460 Zfyve27-007 retained_intron Mus_musculus 0 431
ENSMUST00000166788 Zfyve27-002 retained_intron Mus_musculus 8.00141e-43 180
ENSMUST00000164455 Zfyve27-004 retained_intron Mus_musculus 5e-40 171

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