C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018820 Zfyve27 10090 + 19:42163951-42194590 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099443 Zfyve27-003 42170594-42191717 protein_coding
  ENSMUST00000164455 Zfyve27-004 42163951-42177726 retained_intron
  ENSMUST00000164460 Zfyve27-007 42185335-42190514 retained_intron
  ENSMUST00000165783 Zfyve27-006 42183485-42184828 retained_intron
  ENSMUST00000166788 Zfyve27-002 42170700-42173206 retained_intron
  ENSMUST00000168130 Zfyve27-005 42178823-42184159 protein_coding
  ENSMUST00000169536 Zfyve27-001 42170567-42194590 protein_coding
  ENSMUST00000170184 Zfyve27-008 42185609-42190894 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099443ENSMUST00000169536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099443 10.874±2.99 8.768±1.38 9.993±1.47 10.296±3.94 9.171±0.56 8.408±0.88 5.037±0.20 7.403±0.71 4.562±0.85 9.557±0.90 3.960±0.49 8.071±1.06 8.925±3.02 11.156±4.34
ENSMUST00000169536 2.379±0.53 7.371±0.73 1.851±0.29 8.230±0.41 2.819±0.00 2.575±0.00 N/A N/A 0.840±0.06 4.660±0.19 0.391±0.00 2.977±1.94 1.225±0.24 2.952±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VD CIL_0004VD_0002 CGP 19:42147400-42194590
CIL_0004V8 CIL_0004V8_0002 CGP 19:42163951-42202252

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0031175 ISS neuron projection development
GO:0032584 IDA growth cone membrane
GO:0046872 IEA metal ion binding
GO:0048011 ISS neurotrophin TRK receptor signaling pathway
GO:0055038 ISS recycling endosome membrane
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059835 zfyve27 zinc finger, FYVE domain containing 27 protein_coding Danio_rerio
ENSG00000155256 ZFYVE27 zinc finger, FYVE domain containing 27 protein_coding Homo_sapiens

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