C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein interacting with the FHA domain of MKI67
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155438 NIFK 9606 - 2:121726945-121736923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285814 NIFK-001 121726945-121736923 protein_coding
  ENST00000423105 NIFK-007 121727347-121730943 protein_coding
  ENST00000447132 NIFK-005 121727797-121735805 protein_coding
  ENST00000451734 NIFK-004 121728507-121736911 protein_coding
  ENST00000477693 NIFK-003 121730383-121736872 retained_intron
  ENST00000481978 NIFK-006 121727676-121731189 retained_intron
  ENST00000498570 NIFK-008 121727731-121728599 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285814ENST00000423105ENST00000447132ENST00000451734ENST00000481978ENST00000498570
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285814 2.625±0.00 5.789±0.00 1.530±0.00 4.114±2.05 1.903±0.43 3.868±1.24 2.441±0.04 6.953±4.51 5.437±0.42 2.882±0.60 7.965±0.00 17.003±3.04 7.758±0.91 6.779±0.00
ENST00000423105 N/A N/A N/A N/A 4.443±0.00 N/A N/A 3.520±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447132 N/A N/A N/A N/A 3.240±0.00 N/A N/A N/A 4.037±0.00 4.439±0.00 8.006±0.00 16.681±0.00 N/A 5.284±0.06
ENST00000451734 N/A N/A N/A N/A 5.435±0.00 N/A N/A N/A N/A N/A 2.057±0.00 N/A N/A N/A
ENST00000481978 N/A N/A N/A N/A N/A 4.012±0.00 N/A N/A N/A N/A N/A 32.703±0.00 15.870±0.00 10.057±0.00
ENST00000498570 N/A N/A N/A 15.896±0.00 13.018±0.00 N/A N/A N/A N/A N/A 4.746±0.00 37.707±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000794 IDA condensed nuclear chromosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006461 NAS protein complex assembly
GO:0009303 NAS rRNA transcription
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016072 NAS rRNA metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040666 nifk nucleolar protein interacting with the FHA domain of MKI67 protein_coding Danio_rerio
ENSMUSG00000026377 Nifk nucleolar protein interacting with the FHA domain of MKI67 protein_coding Mus_musculus

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