C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein interacting with the FHA domain of MKI67
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285814 NIFK-001 ENSG00000155438 9606 - 2:121726945-121736923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285814 2.625±0.00 5.789±0.00 1.530±0.00 4.114±2.05 1.903±0.43 3.868±1.24 2.441±0.04 6.953±4.51 5.437±0.42 2.882±0.60 7.965±0.00 17.003±3.04 7.758±0.91 6.779±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000794 IDA condensed nuclear chromosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006461 NAS protein complex assembly
GO:0009303 NAS rRNA transcription
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016072 NAS rRNA metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027626 Nifk-001 protein_coding Mus_musculus 0 243
ENSMUST00000112688 Nifk-002 protein_coding Mus_musculus 0 206
ENSMUST00000161495 Nifk-003 protein_coding Mus_musculus 0 193

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