C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein interacting with the FHA domain of MKI67
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026377 Nifk 10090 + 1:118321839-118333822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027626 Nifk-001 118321839-118333822 protein_coding
  ENSMUST00000112688 Nifk-002 118321854-118332941 protein_coding
  ENSMUST00000161495 Nifk-003 118322152-118329380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027626ENSMUST00000112688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027626 7.059±2.39 3.123±1.28 9.427±1.35 5.591±2.32 4.617±1.09 3.446±1.08 3.886±0.61 4.980±0.71 12.314±8.43 4.348±0.74 5.549±1.06 6.183±3.21 16.108±7.89 2.778±0.44
ENSMUST00000112688 N/A N/A N/A 6.214±0.00 N/A N/A N/A N/A N/A N/A N/A 13.944±0.00 12.018±7.37 11.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0002 CGP 1:118321839-118612678

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000794 IEA condensed nuclear chromosome
GO:0003723 ISO RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005730 ISO nucleolus
GO:0005737 ISO cytoplasm
GO:0010923 ISS negative regulation of phosphatase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040666 nifk nucleolar protein interacting with the FHA domain of MKI67 protein_coding Danio_rerio
ENSG00000155438 NIFK nucleolar protein interacting with the FHA domain of MKI67 protein_coding Homo_sapiens

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