C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Src-like-adaptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155926 SLA 9606 - 8:133036724-133103054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338087 SLA-003 133036724-133103054 protein_coding
  ENST00000395352 SLA-001 133037653-133102912 protein_coding
  ENST00000427060 SLA-010 133037639-133060358 protein_coding
  ENST00000517549 SLA-021 133038260-133040341 retained_intron
  ENST00000517615 SLA-023 133072908-133076127 processed_transcript
  ENST00000517648 SLA-004 133038427-133102612 protein_coding
  ENST00000517932 SLA-014 133074875-133102612 processed_transcript
  ENST00000518565 SLA-002 133048579-133102876 processed_transcript
  ENST00000518594 SLA-007 133050210-133075022 retained_intron
  ENST00000519341 SLA-015 133047908-133102663 protein_coding
  ENST00000519504 SLA-020 133050210-133060288 retained_intron
  ENST00000519558 SLA-018 133060118-133102605 protein_coding
  ENST00000519747 SLA-016 133050892-133102610 protein_coding
  ENST00000520106 SLA-006 133049332-133075027 retained_intron
  ENST00000521302 SLA-017 133050831-133102605 protein_coding
  ENST00000521823 SLA-019 133047846-133102628 processed_transcript
  ENST00000522002 SLA-009 133048579-133074953 processed_transcript
  ENST00000522119 SLA-013 133044992-133102477 protein_coding
  ENST00000522432 SLA-022 133049927-133075035 nonsense_mediated_decay
  ENST00000522946 SLA-012 133063674-133102542 processed_transcript
  ENST00000523224 SLA-008 133047105-133074959 retained_intron
  ENST00000523610 SLA-011 133050856-133102542 protein_coding
  ENST00000524345 SLA-005 133038367-133102628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000338087ENST00000427060ENST00000517549ENST00000519504ENST00000519558ENST00000520106ENST00000522002ENST00000524345
Transcript ID Adipose Adrenal Bladder Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000338087 9.067±0.00 9.436±0.00 N/A 3.623±0.00 3.003±0.00 N/A N/A N/A N/A 3.193±1.02 N/A
ENST00000427060 N/A N/A N/A N/A N/A N/A N/A N/A 1.476±0.06 0.871±0.00 N/A
ENST00000517549 N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 N/A N/A N/A
ENST00000519504 N/A N/A 0.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00
ENST00000520106 N/A N/A N/A N/A N/A 1.852±0.00 7.189±0.00 N/A 2.258±0.00 N/A N/A
ENST00000522002 N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A
ENST00000524345 N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PY CIL_0004PY_0001 CGP 8:132775358-133134903
CIL_0009D4 CIL_0009D4_0001 VISTA 8:132792656-133394938
CIL_0004PV CIL_0004PV_0001 CGP 8:132866958-133134903
CIL_0003DW CIL_0003DW_0002 CGP 8:133036724-133230344

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI:IEA protein binding
GO:0005768 IEA endosome
GO:0009967 TAS positive regulation of signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054340 sla1 Src-like-adaptor 1 protein_coding Danio_rerio
ENSMUSG00000022372 Sla src-like adaptor protein_coding Mus_musculus

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