C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: src-like adaptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022372 Sla 10090 - 15:66780819-66831829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100572 Sla-201 66780864-66812593 protein_coding
  ENSMUST00000164163 Sla-001 66780819-66831646 protein_coding
  ENSMUST00000164939 Sla-002 66785720-66803749 retained_intron
  ENSMUST00000168522 Sla-004 66782542-66831829 protein_coding
  ENSMUST00000168589 Sla-003 66782078-66801593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100572ENSMUST00000164163ENSMUST00000164939ENSMUST00000168522ENSMUST00000168589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100572 0.312±0.00 N/A 0.878±0.19 1.005±0.46 2.383±1.04 0.201±0.00 0.437±0.10 N/A 1.796±1.01 1.677±0.03 0.178±0.20 1.335±0.61 0.539±0.18 0.064±0.04
ENSMUST00000164163 1.209±0.67 1.188±0.19 0.652±0.03 1.836±1.15 3.311±0.65 0.477±0.17 0.341±0.15 0.550±0.35 1.929±1.80 4.528±0.21 0.127±0.00 0.779±0.45 0.365±0.02 0.094±0.05
ENSMUST00000164939 0.125±0.07 N/A N/A N/A N/A N/A 0.031±0.01 N/A 0.094±0.00 N/A N/A 0.068±0.02 N/A 0.018±0.00
ENSMUST00000168522 1.714±0.00 1.159±0.27 N/A 1.173±0.00 3.729±0.95 0.794±0.32 0.479±0.08 0.603±0.07 N/A 4.055±0.42 N/A 0.727±0.09 N/A 0.139±0.00
ENSMUST00000168589 1.128±0.24 0.599±0.04 N/A N/A 4.700±1.46 0.969±0.33 0.554±0.00 0.622±0.21 1.554±0.00 2.804±0.51 0.051±0.01 0.664±0.22 0.322±0.00 0.091±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D4 CIL_0009D4_0002 VISTA 15:66524301-67127162
CIL_0004PY CIL_0004PY_0002 CGP 15:66577572-66850721
CIL_0004PV CIL_0004PV_0002 CGP 15:66670753-66850721
CIL_0003DW CIL_0003DW_0003 CGP 15:66780819-66923201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054340 sla1 Src-like-adaptor 1 protein_coding Danio_rerio
ENSG00000155926 SLA Src-like-adaptor protein_coding Homo_sapiens

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