C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000042832-ENSG00000042832 CGP 9606 8:132866958-133134903
GeneTranscriptPositionBiotype
ENSG00000042832 (TG)
thyroglobulin 		ENST00000220616 (TG-001) 132866961-133134897 protein_coding
ENST00000518058 (TG-004) 132962994-132967897 protein_coding
ENST00000518097 (TG-018) 132897734-132899000 retained_intron
ENST00000518108 (TG-010) 133017699-133029979 protein_coding
ENST00000518505 (TG-017) 132897748-132906900 protein_coding
ENST00000519178 (TG-003) 132919440-133134827 protein_coding
ENST00000519294 (TG-012) 132971827-133003256 processed_transcript
ENST00000519543 (TG-005) 132964607-133134903 protein_coding
ENST00000520089 (TG-015) 132969486-132983753 retained_intron
ENST00000520197 (TG-011) 132969458-133003256 processed_transcript
ENST00000520769 (TG-019) 132881872-132883240 retained_intron
ENST00000521107 (TG-007) 133113503-133134891 protein_coding
ENST00000522523 (TG-016) 132972261-133017967 processed_transcript
ENST00000522691 (TG-006) 133133387-133134877 retained_intron
ENST00000522797 (TG-013) 132972632-133013683 nonsense_mediated_decay
ENST00000522809 (TG-008) 133095159-133113668 retained_intron
ENST00000522996 (TG-009) 133094623-133113496 retained_intron
ENST00000523756 (TG-002) 132897689-133134897 nonsense_mediated_decay
ENST00000523901 (TG-020) 132866958-132881895 nonsense_mediated_decay
ENST00000524151 (TG-014) 132971851-133002285 processed_transcript
ENSG00000155926 (SLA)
Src-like-adaptor 		ENST00000338087 (SLA-003) 133036724-133103054 protein_coding
ENST00000395352 (SLA-001) 133037653-133102912 protein_coding
ENST00000427060 (SLA-010) 133037639-133060358 protein_coding
ENST00000517549 (SLA-021) 133038260-133040341 retained_intron
ENST00000517615 (SLA-023) 133072908-133076127 processed_transcript
ENST00000517648 (SLA-004) 133038427-133102612 protein_coding
ENST00000517932 (SLA-014) 133074875-133102612 processed_transcript
ENST00000518565 (SLA-002) 133048579-133102876 processed_transcript
ENST00000518594 (SLA-007) 133050210-133075022 retained_intron
ENST00000519341 (SLA-015) 133047908-133102663 protein_coding
ENST00000519504 (SLA-020) 133050210-133060288 retained_intron
ENST00000519558 (SLA-018) 133060118-133102605 protein_coding
ENST00000519747 (SLA-016) 133050892-133102610 protein_coding
ENST00000520106 (SLA-006) 133049332-133075027 retained_intron
ENST00000521302 (SLA-017) 133050831-133102605 protein_coding
ENST00000521823 (SLA-019) 133047846-133102628 processed_transcript
ENST00000522002 (SLA-009) 133048579-133074953 processed_transcript
ENST00000522119 (SLA-013) 133044992-133102477 protein_coding
ENST00000522432 (SLA-022) 133049927-133075035 nonsense_mediated_decay
ENST00000522946 (SLA-012) 133063674-133102542 processed_transcript
ENST00000523224 (SLA-008) 133047105-133074959 retained_intron
ENST00000523610 (SLA-011) 133050856-133102542 protein_coding
ENST00000524345 (SLA-005) 133038367-133102628 protein_coding
ENSG00000276961 (MIR7848)
microRNA 7848 		ENST00000617402 (MIR7848-201) 133046481-133046581 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004PV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053469-ENSMUSG00000053469 CGP 10090 15:66670753-66850721
GeneTranscriptPositionBiotype
ENSMUSG00000022372 (Sla)
src-like adaptor 		ENSMUST00000100572 (Sla-201) 66780864-66812593 protein_coding
ENSMUST00000164163 (Sla-001) 66780819-66831646 protein_coding
ENSMUST00000164939 (Sla-002) 66785720-66803749 retained_intron
ENSMUST00000168522 (Sla-004) 66782542-66831829 protein_coding
ENSMUST00000168589 (Sla-003) 66782078-66801593 protein_coding
ENSMUSG00000053469 (Tg)
thyroglobulin 		ENSMUST00000065916 (Tg-001) 66670753-66850721 protein_coding
ENSMUST00000163495 (Tg-004) 66688836-66850607 nonsense_mediated_decay
ENSMUST00000166403 (Tg-002) 66798750-66850721 processed_transcript
ENSMUST00000166906 (Tg-008) 66715889-66725247 processed_transcript
ENSMUST00000167344 (Tg-007) 66716531-66729629 processed_transcript
ENSMUST00000167512 (Tg-006) 66701279-66715135 processed_transcript
ENSMUST00000171045 (Tg-003) 66705290-66850607 protein_coding
ENSMUST00000172153 (Tg-005) 66736250-66850721 protein_coding
ENSMUSG00000090464 (Gm17140)
predicted gene 17140 		ENSMUST00000169163 (Gm17140-001) 66739059-66744327 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PV_0001ENSG00000042832ENST00000220616ENST00000518097ENST00000518108ENST00000518505ENST00000519178ENST00000519294ENST00000519543ENST00000520089ENST00000520197ENST00000520769ENST00000521107ENST00000522523ENST00000522691ENST00000522809ENST00000522996ENST00000523756ENSG00000155926ENST00000338087ENST00000427060ENST00000517549ENST00000519504ENST00000519558ENST00000520106ENST00000522002ENST00000524345ENSG00000276961ENST00000617402CIL_0004PV_0002ENSMUSG00000022372ENSMUST00000100572ENSMUST00000164163ENSMUST00000164939ENSMUST00000168522ENSMUST00000168589ENSMUSG00000053469ENSMUST00000065916ENSMUST00000163495ENSMUST00000166403ENSMUST00000166906ENSMUST00000167512ENSMUST00000171045ENSMUST00000172153ENSMUSG00000090464ENSMUST00000169163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000042832 ENST00000220616 0.051±0.00 N/A N/A 0.026±0.01 N/A 0.063±0.01 0.019±0.00 0.029±0.00 N/A N/A N/A 0.895±0.54 0.036±0.01 N/A
ENST00000518058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518097 N/A N/A N/A N/A N/A 1.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518108 N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A 0.350±0.00 N/A
ENST00000518505 N/A N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A
ENST00000519178 N/A N/A 0.270±0.00 N/A 0.380±0.21 N/A N/A 0.401±0.00 N/A 0.019±0.00 N/A 0.143±0.00 N/A 0.353±0.14
ENST00000519294 N/A N/A N/A N/A N/A N/A N/A N/A 0.791±0.00 N/A 0.139±0.00 N/A N/A N/A
ENST00000519543 N/A N/A N/A 0.047±0.00 N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.099±0.00 0.464±0.00
ENST00000520089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.984±0.00 N/A N/A
ENST00000520197 0.318±0.00 N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000520769 N/A N/A N/A N/A N/A N/A N/A N/A 0.773±0.00 0.433±0.00 N/A N/A N/A N/A
ENST00000521107 N/A 0.824±0.00 N/A N/A 0.425±0.00 N/A N/A 3.694±0.00 N/A N/A N/A 12.678±0.00 0.231±0.00 1.045±0.00
ENST00000522523 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A 1.220±0.00 N/A N/A
ENST00000522691 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A
ENST00000522797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522809 N/A N/A 0.840±0.00 0.163±0.00 N/A N/A N/A N/A 0.789±0.00 0.140±0.00 N/A 1.707±0.00 0.469±0.10 N/A
ENST00000522996 N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523756 0.100±0.00 0.124±0.00 N/A 0.016±0.00 N/A 0.221±0.00 N/A N/A 0.068±0.00 N/A N/A 1.231±0.99 N/A 0.363±0.24
ENST00000523901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155926 ENST00000338087 9.067±0.00 9.436±0.00 N/A 3.623±0.00 N/A N/A 3.003±0.00 N/A N/A N/A N/A N/A 3.193±1.02 N/A
ENST00000395352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.476±0.06 0.871±0.00 N/A
ENST00000517549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 N/A N/A N/A
ENST00000517615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519504 N/A N/A 0.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00
ENST00000519747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520106 N/A N/A N/A N/A N/A N/A N/A N/A 1.852±0.00 7.189±0.00 N/A 2.258±0.00 N/A N/A
ENST00000521302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A
ENST00000522119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524345 N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000276961 ENST00000617402 N/A 1.328±0.00 N/A N/A N/A N/A N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022372 ENSMUST00000100572 0.312±0.00 N/A 0.878±0.19 1.005±0.46 2.383±1.04 0.201±0.00 0.437±0.10 N/A 1.796±1.01 1.677±0.03 0.178±0.20 1.335±0.61 0.539±0.18 0.064±0.04
ENSMUST00000164163 1.209±0.67 1.188±0.19 0.652±0.03 1.836±1.15 3.311±0.65 0.477±0.17 0.341±0.15 0.550±0.35 1.929±1.80 4.528±0.21 0.127±0.00 0.779±0.45 0.365±0.02 0.094±0.05
ENSMUST00000164939 0.125±0.07 N/A N/A N/A N/A N/A 0.031±0.01 N/A 0.094±0.00 N/A N/A 0.068±0.02 N/A 0.018±0.00
ENSMUST00000168522 1.714±0.00 1.159±0.27 N/A 1.173±0.00 3.729±0.95 0.794±0.32 0.479±0.08 0.603±0.07 N/A 4.055±0.42 N/A 0.727±0.09 N/A 0.139±0.00
ENSMUST00000168589 1.128±0.24 0.599±0.04 N/A N/A 4.700±1.46 0.969±0.33 0.554±0.00 0.622±0.21 1.554±0.00 2.804±0.51 0.051±0.01 0.664±0.22 0.322±0.00 0.091±0.06
ENSMUSG00000053469 ENSMUST00000065916 0.013±0.01 N/A N/A N/A 0.014±0.00 N/A 0.068±0.02 N/A 0.011±0.00 0.085±0.02 0.010±0.00 0.024±0.01 0.012±0.00 0.210±0.02
ENSMUST00000163495 0.004±0.00 0.045±0.01 0.017±0.00 0.015±0.00 0.067±0.02 N/A 0.059±0.00 N/A 0.016±0.00 0.225±0.10 0.020±0.00 0.097±0.00 0.015±0.00 0.528±0.26
ENSMUST00000166403 0.045±0.02 0.048±0.03 N/A 0.031±0.02 0.107±0.00 0.387±0.15 0.665±0.17 0.198±0.07 0.382±0.23 N/A 0.074±0.02 0.204±0.06 0.222±0.11 0.943±0.27
ENSMUST00000166906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A
ENSMUST00000167344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167512 N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A
ENSMUST00000171045 0.019±0.00 0.089±0.00 0.042±0.00 N/A N/A 0.019±0.00 0.271±0.00 0.030±0.01 N/A 0.063±0.00 0.009±0.00 0.109±0.05 N/A N/A
ENSMUST00000172153 0.034±0.00 0.065±0.03 0.028±0.00 0.023±0.02 0.154±0.07 N/A N/A N/A N/A 0.267±0.00 N/A 0.263±0.18 0.099±0.05 0.480±0.20
ENSMUSG00000090464 ENSMUST00000169163 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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