C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FCH domain only 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157107 FCHO2 9606 + 5:72955981-73090522 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287761 FCHO2-002 72956071-73038123 protein_coding
  ENST00000430046 FCHO2-001 72955981-73090522 protein_coding
  ENST00000503302 FCHO2-005 73051100-73052856 retained_intron
  ENST00000507345 FCHO2-007 72956066-73017282 protein_coding
  ENST00000508431 FCHO2-004 73058421-73077440 retained_intron
  ENST00000511264 FCHO2-003 73034468-73037192 retained_intron
  ENST00000512348 FCHO2-006 72956069-73088428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287761ENST00000430046ENST00000508431ENST00000512348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287761 N/A N/A N/A N/A N/A N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A N/A
ENST00000430046 6.369±0.00 1.396±0.00 0.786±0.00 1.657±0.40 3.811±1.11 3.488±0.83 2.881±0.00 3.406±0.00 2.093±1.56 5.779±4.38 0.856±0.00 2.676±0.29 2.108±1.20 2.589±0.00
ENST00000508431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.410±0.00 N/A N/A N/A
ENST00000512348 N/A N/A 1.230±0.00 0.836±0.00 2.055±0.00 1.416±0.00 1.140±0.00 2.461±0.00 3.162±0.00 N/A N/A 1.630±0.94 1.557±0.00 1.578±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KX CIL_0007KX_0001 UCNEbase 5:72908703-73338640

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001786 ISS phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 ISS plasma membrane
GO:0005905 IDA coated pit
GO:0010324 ISS membrane invagination
GO:0030136 IDA clathrin-coated vesicle
GO:0035091 ISS phosphatidylinositol binding
GO:0048268 IMP clathrin coat assembly
GO:0072583 IMP clathrin-mediated endocytosis
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000041685 Fcho2 FCH domain only 2 protein_coding Mus_musculus

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