C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCH domain only 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430046 FCHO2-001 ENSG00000157107 9606 + 5:72955981-73090522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430046
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430046 6.369±0.00 1.396±0.00 0.786±0.00 1.657±0.40 3.811±1.11 3.488±0.83 2.881±0.00 3.406±0.00 2.093±1.56 5.779±4.38 0.856±0.00 2.676±0.29 2.108±1.20 2.589±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KX CIL_0007KX_0001 UCNEbase 5:72908703-73338640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 ISS phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 ISS plasma membrane
GO:0005905 IDA coated pit
GO:0010324 ISS membrane invagination
GO:0030136 IDA clathrin-coated vesicle
GO:0035091 ISS phosphatidylinositol binding
GO:0048268 IMP clathrin coat assembly
GO:0072583 IMP clathrin-mediated endocytosis
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040340 Fcho2-201 protein_coding Mus_musculus 0 4065
ENSMUST00000099277 Fcho2-202 protein_coding Mus_musculus 0 3945
ENSMUST00000179563 Fcho2-204 protein_coding Mus_musculus 0 1748
ENSMUST00000109403 Fcho2-203 protein_coding Mus_musculus 0 1718

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